Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0156 |
Symbol | ubiA |
ID | 6108935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 162150 |
End bp | 163040 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641619912 |
Product | 4-hydroxybenzoate octaprenyltransferase |
Protein accession | YP_001747031 |
Protein GI | 170719343 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.594676 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCTGC AACTGCTCAA GTCGCTCAAC CGCGTGCACC CGCGCGCCTG GGACTTCATC CAGCTCAGCC GCATGGACCG GCCGATCGGC ATCTACCTGC TGCTGTGGCC GACCCTGACG GCGGTGTGGA TTGCAGGCCT TGGTTCGCCC ACCTTGGCCA ACGTGCTGAT CTTCGGCCTA GGCGTGGTGC TGATGCGTGC CGCTGGCTGC TGCATCAATG ACTTCGCCGA TCGCAAGGTC GATGGCCACG TCAAACGCAC CGCCGACCGC CCGCTGGCCA GTGGGCGGGT CAAGCCACGC GAGGCGCTGG CGCTGTTCGG GATCCTGGTG GCGGTGAGCT TCCTGCTGGT GCTGTGTACC AACAGCAAGA CCGTGTGGCT GTCATTCGGC GCGGTGGCTT TGGCGTTCTG TTACCCGTTC ATGAAGCGCT ACACCTATTA CCCGCAGGTG GTGCTGGGGG CTGCGTATTC CTGGGGTATC CCCATGGCCT TCACTGCCGC CGGCGGCGAG TTGCCGGCCA GCGCCTGGCT GCTGTACATC GCCAACCTGC TGTGGACGGT GGGCTACGAT ACCTACTACG CCATGGTCGA CCGGGACGAT GACCTGAAAA TCGGGGTGAA ATCGACCGCG ATCCTGTTCG GCGAATCCGA CCGGATGATC ATCCTGACCC TGCAGATGCT GTCGCTGGGC TGCCTGTTGC TGGCGGGGAG CCGCTTCGAG CTGGGTGGCT GGTTCCATCT TGGGCTGCTG GGCGCCGCCC TGTGCTTTGC CTGGGAGTAC TGGTCGACGC GCAAGCTGGA CAGAGAGTCG TGCTTCAAGG CGTTTCTTCA CAACCACTGG GCGGGGCTGC TGGTGTTCAT GGGTGTGGTG CTCGATTACG CCCTGCGCTG A
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Protein sequence | MYLQLLKSLN RVHPRAWDFI QLSRMDRPIG IYLLLWPTLT AVWIAGLGSP TLANVLIFGL GVVLMRAAGC CINDFADRKV DGHVKRTADR PLASGRVKPR EALALFGILV AVSFLLVLCT NSKTVWLSFG AVALAFCYPF MKRYTYYPQV VLGAAYSWGI PMAFTAAGGE LPASAWLLYI ANLLWTVGYD TYYAMVDRDD DLKIGVKSTA ILFGESDRMI ILTLQMLSLG CLLLAGSRFE LGGWFHLGLL GAALCFAWEY WSTRKLDRES CFKAFLHNHW AGLLVFMGVV LDYALR
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