| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0152 |
|---|
| Symbol | |
|---|
| ID | 6108931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 157941 |
|---|
| End bp | 159281 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641619908 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001747027 |
|---|
| Protein GI | 170719339 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCTT CCCCTGGTAT CAGCCTCACC TCGTTATTCG CCGATTTCGG CATGATTCTC
TTTGCCCTGT TCCTGGTGCT GCTCAACGGC TTTTTCGTAG CCGCCGAGTT CGCCATGGTC
AAGCTGCGCT CAACGCGTGT CGAATCCATT GCAGAGCAGC ACGGCTGGCG CGGCAGCATC
CTGCGCAAGG TACATAACCA GCTCGACGCC TACCTGTCGG CCTGCCAGCT GGGTATCACC
CTCGCCTCTC TGGGCCTTGG CTGGGTCGGT GAGCCGGCAT TCGCCCACCT GCTAGAGCCG
CTGCTGGCGT ACCTGGGCGT GGACACGCCA GAGTTGATCA AGGGTGTCTC GTTCTTCGTC
GCCTTCTTCG TCATCTCGTA CCTGCACATC GTGGTCGGTG AGCTGGCGCC CAAATCCTGG
GCGATCCGCA AGCCCGAACT GTTGTCGCTG TGGACTGCGG TGCCGCTTTA CCTGTTCTAC
TGGCTGATGT ACCCGGCCAT CTACCTGCTC AACGCCAGTG CCAACACCAT CCTGCGCTTT
GCCGGCCAGG GCGAGCCTGG CCCGCACCAC GAGCACCATT ACAGCCGTGA AGAGCTCAAG
CTGATCCTGC ACTCCAGCCG TGGCCAGGAC CCGAGCGACC AGGGTATGCG TGTACTGGCC
TCGGCCGTGG AAATGGGCGA GCTGGAAGTA GTCGACTGGG CCAACTCGCG CGAAGACATG
GTCAGCATCG ACGCCCATGC GCCACTCAAG GAAATCCTGG CTCTGGTGCG CCGCCACAAG
TTCAGCCGCT ATCCGCTGTA CGACGCCGAG CGTGAGGAGT TCACCGGGCT TTTGCACATC
AAGGATCTGC TGCTGGAACT GGCCGAGCTC GAGCACCTGC CCGAAACCGT CGACCTCGAA
GACCTGGCCC GCCCACTGGA GCGTGTATCG CGGCACATGC CGTTGTCCCA GCTGCTGGAG
CAGTTCCGCA AGGGCGGTGC GCACTTCGTG CTGGTCGAGG AAGCCGATGG CAAGGTGATC
GGCTACCTGA CCATGGAAGA TGTGCTGGAA GTGCTGGTGG GCGACATTCA GGACGAACAC
CGCAAGACCG AGCGCGGCAT CCTGGCCTAC CAGCCAGGCA AACTGCTGGT GCGTGGCGAC
ACGCCGCTGT TCAAGGTGGA GCGCCTGCTG GGCATCGACC TTGACCACAT CGAAGCGGAA
ACTCTGGCCG GGCTTATCTA CGAAACGCTC AAGCGCGTGC CTGAGGAAGA GGAAGTGCTG
GAAGTCGAAG GCCTGCGCAT CATCATCAAG AAGATGAAAG GGCCCAAGAT CGTGCTGGCC
AAGGTGCTCA AGCTCGACTG A
|
|---|
| Protein sequence | MDPSPGISLT SLFADFGMIL FALFLVLLNG FFVAAEFAMV KLRSTRVESI AEQHGWRGSI
LRKVHNQLDA YLSACQLGIT LASLGLGWVG EPAFAHLLEP LLAYLGVDTP ELIKGVSFFV
AFFVISYLHI VVGELAPKSW AIRKPELLSL WTAVPLYLFY WLMYPAIYLL NASANTILRF
AGQGEPGPHH EHHYSREELK LILHSSRGQD PSDQGMRVLA SAVEMGELEV VDWANSREDM
VSIDAHAPLK EILALVRRHK FSRYPLYDAE REEFTGLLHI KDLLLELAEL EHLPETVDLE
DLARPLERVS RHMPLSQLLE QFRKGGAHFV LVEEADGKVI GYLTMEDVLE VLVGDIQDEH
RKTERGILAY QPGKLLVRGD TPLFKVERLL GIDLDHIEAE TLAGLIYETL KRVPEEEEVL
EVEGLRIIIK KMKGPKIVLA KVLKLD
|
|---|
| |