| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0142 |
|---|
| Symbol | |
|---|
| ID | 6108921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 145581 |
|---|
| End bp | 146477 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641619898 |
|---|
| Product | aldose 1-epimerase |
|---|
| Protein accession | YP_001747017 |
|---|
| Protein GI | 170719329 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCT TCCAGGTTGT AACCGAGCAA CACGGCGAAC TCAACTGCTG GCGTATCACC
AGCGACCGTG CCGAACTACT GATCGCCCAG CAGGGCGCGC AGATCCTCAG CTACCAGCAC
ATTGGCGAGC CGCCGCTGCT GTGGCTGAGT GACCAGGCCA TGTTCCGTCA GGGTAAGTCG
GTGCGCGCAG GTGTGCCGGT GTGCTGGCCG TGGTTCGGTA ACCTGCAGCG CAACCCCGAA
TCCGTCCAGG GCATGTACCG TGGCACACAG GCTCCCGCCC ATGGGTTGGC CCGCACACGG
GACTGGCAAC TGCTGGGCAT CGAAGAAGCA GCCAGCGCGC TGCGCATCGA ATTCGAACTG
CCGGAGGCCC AGGGCGACCT GCCGGAGTGG CCACATGATG TGGAGCTGAA GCTGCTGATC
GTCATGGGTG ATGCGCTTGA ACTGACCCTC ACCAGCCGTA ACAGGGGCAA TACCCCTGTC
ACCATCAGCC AGGCCCTGCA CAGCTATTTT GCCGTCAGCG ATGTGCGTCA GGCGCGGGTC
GAGGGTGTCG ACGGGCTGGG CTACATCGAG ACTCTGGCTG ACTGGGAACA GCGCCAGCAG
CAGGGTGCGC TGACGTTCAC CGGTGAGACC GATCGCATCT ACCTGAATAC GCCTGCGCAA
CTGGGCATTG TCGACCCGCA CTGGAACCGG CGCATTACCC TGAGCAGCAG CGGTTCACGT
TCAGCGGTGA TCTGGAACCC ATGGACCGAC AGAGCCCAGG AATTGCCTGA CATGGCCGAT
GATGGCTGGC AGCGAATGCT GTGCATCGAG ACGGCGAATG TCTGGGACGA TGTGGTGGAG
TTGAAGCCTG GGGCGTTCCA TTCGCTGCAA GTGGCAATTG GCAGCGAAGC GCTTTGA
|
|---|
| Protein sequence | MATFQVVTEQ HGELNCWRIT SDRAELLIAQ QGAQILSYQH IGEPPLLWLS DQAMFRQGKS
VRAGVPVCWP WFGNLQRNPE SVQGMYRGTQ APAHGLARTR DWQLLGIEEA ASALRIEFEL
PEAQGDLPEW PHDVELKLLI VMGDALELTL TSRNRGNTPV TISQALHSYF AVSDVRQARV
EGVDGLGYIE TLADWEQRQQ QGALTFTGET DRIYLNTPAQ LGIVDPHWNR RITLSSSGSR
SAVIWNPWTD RAQELPDMAD DGWQRMLCIE TANVWDDVVE LKPGAFHSLQ VAIGSEAL
|
|---|
| |