Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0132 |
Symbol | |
ID | 6108911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 136161 |
End bp | 137264 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641619888 |
Product | extracellular solute-binding protein |
Protein accession | YP_001747007 |
Protein GI | 170719319 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.911312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.781797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCGAC TTAAGTGCCT GCTCGCCCCA CTCATAGCAA CCACCCTGTT CACCGGTGCC TTCCAGGCAC AAGCCGAACA GCGCACCTTG CGCGTGTACA ACTGGTTCGA TTACATCACC CCGCAAACCT TGACCGGTTT CCAGAAGGAC AGCGGCGTCA AGCTGGTCTA CGACATCTTC GACACCAACG AAGCCCTGGA AGCGAAGCTG CTAACAGGCA ACTCCGGCTA CGACGTGGTA GTACCGTCCA ACGTGTTTCT CGCCAAGCAG ATCGAGGCGG GGGTGTTCCA GCCACTGGAC CGCAGCAAGC TGCCGAACTG GCAACACTTG GACCCGGCAC TGATGAAGCT CATCGAGGCC AACGATCCGG GCAACAAGTT CGCCGTGCCC TACATGTACG GCACGGTGCT GATCGGCTTC AACCCGGACA AGGTCAAGGC GGTACTTGGC GACACGGCTC CCGTGGACAG CTGGGACCTG CTCTTCAAGG AAGAGAACAT CGCCAAACTC AAGCAGTGCG GCGTAGCGCT GCTTGACTCG CCATCAGAGA TCCTGCCTCT GGCGTTGCAA TACCTGGGGC TGGACCCCAA CAGCAGCAAG CCGGATGACT ACAAGCAAGC CGAAGCTCTG CTGCAGAAGA TCCGCCCCTA CATCACCTAC TTCCACTCTT CCAAGTACAT GGCAGATATC GCCAACGGTG ACATCTGCGT TGCCGTTGGT TATTCCGGTA GTTTCTCCCA GGCAGCAAAC CGCGCCCGGG ATGCGAAGAA CGGTGTGGTG GTGGACATGC GCCTGCCCAA GGAGGGGGCG CCGATATGGT TCGACATGCT GGCGATTCCG AAGGGCGCCG CCAACCCGGA GGATGCGCAT ACGTTCATCA ACTACCTGCT GCGCCCAGAG GTGATTGCCC CGATCAGCGA CTTTGTCGGC TACCCGAACC CGAACAAGGA TGCGACGGAA AAGGTCAGCC CTGCGATTCG CAATAATCCC AACCTGTATC CGACAGCCGA AGCGATGGCC AAGCTGTATA CGCTCAAGCC TTTGACGCGT GAGGCAGAGC GGGCGAGGAC GCGGGCCTGG ACCAGGATCA AGTCCGGGAC TTGA
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Protein sequence | MVRLKCLLAP LIATTLFTGA FQAQAEQRTL RVYNWFDYIT PQTLTGFQKD SGVKLVYDIF DTNEALEAKL LTGNSGYDVV VPSNVFLAKQ IEAGVFQPLD RSKLPNWQHL DPALMKLIEA NDPGNKFAVP YMYGTVLIGF NPDKVKAVLG DTAPVDSWDL LFKEENIAKL KQCGVALLDS PSEILPLALQ YLGLDPNSSK PDDYKQAEAL LQKIRPYITY FHSSKYMADI ANGDICVAVG YSGSFSQAAN RARDAKNGVV VDMRLPKEGA PIWFDMLAIP KGAANPEDAH TFINYLLRPE VIAPISDFVG YPNPNKDATE KVSPAIRNNP NLYPTAEAMA KLYTLKPLTR EAERARTRAW TRIKSGT
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