| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0130 |
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| Symbol | |
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| ID | 6108909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 134541 |
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| End bp | 135434 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641619886 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001747005 |
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| Protein GI | 170719317 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.914448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGACGC TTCTAAGTGC GCAGCGTGCA GGCTGGCGCG ACTATCTGGA GCTGACCAAG
CCCAAGGTGG TGGTGCTGAT GCTGATCACC TCGCTGGTGG GCATGTTCCT GGCGACCCGT
GCCGGGGTAC CTTGGAGCGT GCTGCTGTTC GGCAACCTCG GCATTGCCCT GTGCGCGGGG
GGCGCTGCGG CGGTCAACCA TGTACTGGAC CGACGCATCG ATGCGCTGAT GGCCCGCACC
CACAAGCGGC CGCTGGCCGA GGGCCGGGTC GCGCCACTGC CGGCGTTGCT GTTCGCCCTC
GCCCTGGCGC TGCTGGGCAT GGCACTGTTG CTGATGTTCA CCAACGCCCT TACCGCCTGG
CTGACGCTTG CCTCCCTGCT CGGCTATGCG GTGCTTTATA CCGGCTTTCT CAAGCGTGCG
ACGCCGCAGA ACATCGTTAT CGGTGGCCTC GCAGGCGCGG CGCCGCCGCT GCTCGGCTGG
GTGGCAGTCA GTGGCCATGT CAGTGCCGAG CCTTTGCTGC TGGTGCTGAT CATCTTCGCC
TGGACGCCGC CACACTTCTG GGCCCTGGCC ATTCACCGCA AGGAGGAGTA CGCCAAGGCC
GATATCCCGA TGCTGCCGGT AACCCACGGC GAGCGCTACA CCAAGCTGCA CATCCTGCTC
TACACCCTGA TACTGCTGGC GGTGACCTTG CTGCCCTACG CCATCCACAT GAGCGGCCCG
CTGTATCTGG TCTGCGCCCT CGCCCTTGGC CTGCGCTTCC TGCAATGGGC CTGGGTGTTG
TACCGTGGCA GCCGGCCGCA CGCGGCGATC GGCACGTTCA AGTACTCTAT CGGCTACCTG
TTCGCGCTGT TCATTGCGTT GCTTGTTGAC CACTACCTGT TGCTGAACCT ATGA
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| Protein sequence | MATLLSAQRA GWRDYLELTK PKVVVLMLIT SLVGMFLATR AGVPWSVLLF GNLGIALCAG
GAAAVNHVLD RRIDALMART HKRPLAEGRV APLPALLFAL ALALLGMALL LMFTNALTAW
LTLASLLGYA VLYTGFLKRA TPQNIVIGGL AGAAPPLLGW VAVSGHVSAE PLLLVLIIFA
WTPPHFWALA IHRKEEYAKA DIPMLPVTHG ERYTKLHILL YTLILLAVTL LPYAIHMSGP
LYLVCALALG LRFLQWAWVL YRGSRPHAAI GTFKYSIGYL FALFIALLVD HYLLLNL
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