| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0127 |
|---|
| Symbol | |
|---|
| ID | 6109297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 132158 |
|---|
| End bp | 132922 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641619883 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001747002 |
|---|
| Protein GI | 170719314 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3346] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.894547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATAAGT ATAGCGAGGC GCCCGTGAGG CCGTTTCGCC CGGGCTGGGT ACCCACCCTG
GTAGTGCTTG CGCTACTGCC GGGGTTGATT GCCCTTGGCT GCTGGCAATT GGGCCGAGCC
GACGAAAAGC GCGCATTGCT GGCCAACCAT GCCGAGCGCA GCGTCGACGC GCCGCTTTCC
GCGGCCCAGT TGCAGTTGAG CAACGATACC GCCTTCCGCC GTGTGCACCT CTACGGCCGC
TTCGATGCCG AGCACAGCGT GCTGCTGGAC AATCGCATGC GCGACGGCCA GGCAGGCGTC
GAGTTGCTGC AGCCCTTTCT CGACCAGCCC AGCGGCTTGT GGCTGTTGGT CAACCGCGGG
TGGTTGCCCT GGCCCGACCG CCGCGTACCG GTGCCCTTCG ACACCCCTGC GCAGGCTCTG
GCCCTGGATG CCTCGGTATA CGTAGCACCC GGCAGCACCT TTCAATTGCA CCCCGACCCC
GTTGGGGGCC AGTGGCCGCA CCTGCTGACG GCCGTGAACC CTGCACAACT GTGGCAACAG
CTCCAGCGCG AAGGATTTGC CCATGAACTG CGCCTGCAGC CCGGCCCGGC GGCTTACCGC
CTGGACTGGC CAGTGGTGGC CATGGGGCCG GAGAAACACC TGGGCTATGC CGTGCAATGG
TTCGCCCTGG CCACCGCACT GGTGCTGCTC TACCTCTACT TTGGCTGGCA CAACAAAAAG
GAGAACCGCA ATGGCCGCCA CCACCACTCC ACTGGACATG CCTGA
|
|---|
| Protein sequence | MDKYSEAPVR PFRPGWVPTL VVLALLPGLI ALGCWQLGRA DEKRALLANH AERSVDAPLS
AAQLQLSNDT AFRRVHLYGR FDAEHSVLLD NRMRDGQAGV ELLQPFLDQP SGLWLLVNRG
WLPWPDRRVP VPFDTPAQAL ALDASVYVAP GSTFQLHPDP VGGQWPHLLT AVNPAQLWQQ
LQREGFAHEL RLQPGPAAYR LDWPVVAMGP EKHLGYAVQW FALATALVLL YLYFGWHNKK
ENRNGRHHHS TGHA
|
|---|
| |