| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0112 |
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| Symbol | |
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| ID | 6109282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 115753 |
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| End bp | 116427 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641619868 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001746987 |
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| Protein GI | 170719299 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0709114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0897877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA CTACCGAGAC CACCATGCAC CAGCAGAATA TCCTTTTCGA CCTTGACGGC
ACCCTGACCG ACCCGCGCCT GGGCATTACC CGTTCGATCC AGTATGCCCT GGCCAAACTG
GGCATCGACG AGCCGGACCT GGCGCGGCTC GAGCACTTCA TCGGCCCACC CCTGCTACAG
GCCTTCATGC AGTTCTACCG CTTCGATGAA GCCAAGGCGT GGGAGGCGGT GAACTTTTAC
CGGGAACGCT TCCGTGTCAC CGGCCTTTAC GAAAACCTGG TCTTCGAAGG TGTACCGGAA
CTGCTCCAGG CCCTGAACGG TCAGGGCCGC ACGCTTTACA TCGCGACGTC CAAGCCCTGG
GAGTTCGCCC GTGAGATCGC CAGGCACTTC GCCTTCGATC ATCACTTCAA GGTGATTTAC
GGCAGCGAAC TGGACGGCAC TCGTACCAAC AAGGTCGAGC TGATTCGCCA CCTGCTGGAC
GAGGAAGGGC TGGACCCGGC GCAGACCCTG ATGATCGGCG ACCGCAAGCA CGACCTGATC
GGGGCACGCA GCAATGGGTT GCAGGCAGTG GCAGTGGGGT ATGGGTTCGG CAGCGAAGAA
GAACTGAAGG CCCACACGCC GGAATTCCAC TACGCCACCT TGGCTGAGAT GCATCAGGCG
TTCATCAAGG CCTAA
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| Protein sequence | MNLTTETTMH QQNILFDLDG TLTDPRLGIT RSIQYALAKL GIDEPDLARL EHFIGPPLLQ
AFMQFYRFDE AKAWEAVNFY RERFRVTGLY ENLVFEGVPE LLQALNGQGR TLYIATSKPW
EFAREIARHF AFDHHFKVIY GSELDGTRTN KVELIRHLLD EEGLDPAQTL MIGDRKHDLI
GARSNGLQAV AVGYGFGSEE ELKAHTPEFH YATLAEMHQA FIKA
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