| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0102 |
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| Symbol | |
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| ID | 6109272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 109725 |
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| End bp | 110621 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641619858 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001746977 |
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| Protein GI | 170719289 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00248307 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCACG ACCTCCCTCC CCTGAACGCC CTGCGGGCCT TCGAATCCAC CGCCAGGCTC
AATAGCGTCA GCCAGGCTGC CGAAGCGCTG CATGTGACTC ATGGCGCCGT GAGCCGGCAG
ATCAAGGTGC TGGAGGAACA CCTGGGTGTG GCCTTGTTCG TCAAGGACGG GCGTGGCATC
AAACTCACAG ATGCCGGGGT CAGGCTGCGT GATGCCAGTG GTGAAGCGTT CGACAGGCTG
CGCAGTGTCT GCGCCGAACT CAGCCGGGAT GTCAGCGAGG CGCCATTCGT GCTGGGGTGC
TCGGGTAGCC TGCTGGCGCG ATGGTTCATT CCCCGGCTTG GGCGCCTGAA AGCAGACCTA
CCAGAGTTGC GGCTGCATCT GTCAGCAGGG GAAGGCGACC TTGATCCGCG TCGGCCGGGG
CTCGATGCGC TGCTGGTGTA TGCCGAACCC CCTTGGCCTG CGGACATGCA GGTACATGTA
TTGGCCGAAG AGCGTATCGG GCCAGTGTTG AGCCCACACT TTACCGGTTT CGAGCGGTTG
CGCAGTGCGC CCACCGTGGC GCTGCTGGAC GAAGCCTTGC TGCATACCAC CTCACGCCCG
CAGGCGTGGC CGACCTGGGC CGGACAACAG GGGTTGGACC CGGCTGCACT GCAGTATGGG
CAGGCCTTCG AGCATTTGTA TTACCTGCTG GAGGCGGCTG TGGCAGGGCT GGGGGTGGCT
ATCGCACCGC AGCCGCTGGT GGCGGATGAC TTGCGTGCCG GGCGACTCAG CGCACCGTGG
GGCTTTTCCC CTACTGCAGC GGCGCTGGCA CTTTGGGTGC CACGGCGCGC CGCAGACGGG
CGCGCCGAGC AGCTGGCGCA GTGGCTGCGC CGCGAACTGG AGCGGCAGGC AGGTTAG
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| Protein sequence | MAHDLPPLNA LRAFESTARL NSVSQAAEAL HVTHGAVSRQ IKVLEEHLGV ALFVKDGRGI
KLTDAGVRLR DASGEAFDRL RSVCAELSRD VSEAPFVLGC SGSLLARWFI PRLGRLKADL
PELRLHLSAG EGDLDPRRPG LDALLVYAEP PWPADMQVHV LAEERIGPVL SPHFTGFERL
RSAPTVALLD EALLHTTSRP QAWPTWAGQQ GLDPAALQYG QAFEHLYYLL EAAVAGLGVA
IAPQPLVADD LRAGRLSAPW GFSPTAAALA LWVPRRAADG RAEQLAQWLR RELERQAG
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