| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0100 |
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| Symbol | trpA |
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| ID | 6109270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 107591 |
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| End bp | 108400 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641619856 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001746975 |
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| Protein GI | 170719287 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.882504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000187613 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCGTC TTGAACAACG CTTTGCCGAG CTGAAAGCCG AAGGCCGCTC CGCACTGGTA
ACCTTCGTCA CCGCCGGCGA CCCTGGCTAC GATGCCTCAC TGCAGATCCT CAAGGGCCTG
CCGGCGGCCG GTGCCGATGT GATCGAACTG GGCATGCCGT TCACCGACCC GATGGCCGAT
GGCGTAGCCA TCCAGCTGGC CACGCTGCGT GCGCTGGAAG CAGGCCAGAA CCTGGCCAAG
ACCCTGCAGA TGGTGCGTGA ATTCCGCGTC GACAACCAGG CCACACCGAT CGTGCTGATG
GGTTACTACA ACCCGATCCA CCGCTTTGGT GTAGAGAAAT TCGTCGCAGA AGCCAAAGAA
GCGGGTGTCG ATGGCCTGAT CATCGTCGAC CTGCCGCCGG AGCACGATGC TGAGCTCGCC
ACCCCGGCCC AGGCCGCTGG CATCGACTTC ATTCGCCTGA CCACCCCAAC CACCGACGAT
GCGCGCCTGC CACGGGTGCT GGAGCGCAGC TCCGGGTTCG TCTATTACGT GTCGGTGGCA
GGCGTGACCG GCGCCGGCTC GGCAACCACC GAGCACGTGA CCGAAGCCAT CGCCCGCCTG
CGTCGGCATA CCGATCTGCC GATCAGCGTT GGCTTCGGCA TTCGTACACC AGAGCAGGCC
GCAGCGATTG CGCGCCTGGC TGATGGCGTG GTGGTGGGGT CGGCGCTGGT CGACAAGATC
GCCCAGGCCA AGGACGCCGA TCAGGCCGTT GCCGATGTAT TGAGCCTGTG CTCTGCGCTG
GCTGAAGGTG TGCGCGGCGC TCGACGCTGA
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| Protein sequence | MSRLEQRFAE LKAEGRSALV TFVTAGDPGY DASLQILKGL PAAGADVIEL GMPFTDPMAD
GVAIQLATLR ALEAGQNLAK TLQMVREFRV DNQATPIVLM GYYNPIHRFG VEKFVAEAKE
AGVDGLIIVD LPPEHDAELA TPAQAAGIDF IRLTTPTTDD ARLPRVLERS SGFVYYVSVA
GVTGAGSATT EHVTEAIARL RRHTDLPISV GFGIRTPEQA AAIARLADGV VVGSALVDKI
AQAKDADQAV ADVLSLCSAL AEGVRGARR
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