| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0097 |
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| Symbol | |
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| ID | 6109267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 105615 |
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| End bp | 106514 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641619853 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001746972 |
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| Protein GI | 170719284 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03418] putative choline sulfate-utilization transcription factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.603539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000731437 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGATC ACCTTGCCGA CTTGTCGCTC GACGCATTGC GCGTTTTCGA GGCCGCTGCC
CGCTTGCGTG GTTTCACGGC TGCGGCGCTG GAGTTGGGCA CTACCCAGCC GGCGGTAAGC
CAGCAGGTCA AACGGCTGGA GGCTCGGTTG GGCACGCGTC TGTTTGACCG TATCTACCGC
GGCATCGCGC TGACCGATGC CGGGCAGCTA TTGTTCGAGC AGGTTCATCA AGGCCTGCAG
GCCATGGATG ACGGCATTGC CCAAGCCAGC GGGCGGGGCC AGCGCGAAGT ACTGCAGGTG
GCCACCGATT TCGCCTTCGC AGCGTTCTGG CTGATGCCGC GGTTGCAGCG GTTCCACGAC
GCTTATCCAC AGGTGGACGT TAGCCTGGTG ACCGGTGAGC GCAGCCAGGG GATGCTGCGG
CCGGATATCG ATGTGGCGGT GTTGTTTGGG GATGGGCGGT TCCATCAAGG CGAGAGCCGC
TGGCTGTTCG ATGAAGAAGT ATTCCCGGTC TGCAGCCCTC GGCTGACTCA TGGCAAACCC
TTGTCAGCCG CGGCTTTGCA ACGCTTGCCA CTGCTTCATC TGCGTGGCGA ACAGGCCAGC
CGCTGGTTCG ACTGGGCGGG GGTGTTTCGT GGCTTTGGCG TGCAAAGCCC GCCGCCGCCC
GGGCAGCTTC GGTTCGATAA CTACACGCTG TTGGTCCAGG CGGCAATTGC CGGGCAAGGG
GTAGCGATCG GCTGGCGGCA TCTGGTCGAT GGGCTGGTCG AGCAAGGGTT GCTGTGCCGG
CCGCTGGAGG GGAGCTTGCG CTCGGCGCGG GGGTATTACG TGGTGTTGCC GCCGCGCAAG
CGGCGTGGGG CGCTGATCGA GCGGTTTGTG GATTGGCTGG AAGATGAGCG GAGTCAGTGA
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| Protein sequence | MFDHLADLSL DALRVFEAAA RLRGFTAAAL ELGTTQPAVS QQVKRLEARL GTRLFDRIYR
GIALTDAGQL LFEQVHQGLQ AMDDGIAQAS GRGQREVLQV ATDFAFAAFW LMPRLQRFHD
AYPQVDVSLV TGERSQGMLR PDIDVAVLFG DGRFHQGESR WLFDEEVFPV CSPRLTHGKP
LSAAALQRLP LLHLRGEQAS RWFDWAGVFR GFGVQSPPPP GQLRFDNYTL LVQAAIAGQG
VAIGWRHLVD GLVEQGLLCR PLEGSLRSAR GYYVVLPPRK RRGALIERFV DWLEDERSQ
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