| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0087 |
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| Symbol | def |
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| ID | 6109257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 95166 |
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| End bp | 95672 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641619843 |
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| Product | peptide deformylase |
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| Protein accession | YP_001746962 |
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| Protein GI | 170719274 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.68939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000133405 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCATTT TGAACATTCT CGAATTCCCA GACCCGCGCC TGCGCACCAT CGCCAAACCG
GTGACGGAGT TCGACGACGC CCTGCGCCAG CTGATCGACG ACATGTTTGA AACCATGTAC
GAAGCGCCTG GCATCGGCCT GGCTGCCACC CAGGTCAACG TCCACAAACA GATTGTGGTC
ATGGACCTGA GCGAAGACCG CAGCGAGCCG CGGGTCTTCA TCAACCCTTC GGTCGAAGAG
CTGACCCACG ACATGGGCCA GTACCAGGAA GGATGCCTGT CGGTGCCGGG CTTCTACGAG
AACGTCGACC GCCCGCTGCG GGTTCGCGTC AAGGCGCAGG ACCGTGACGG CAAGCCTTTC
GAGCTTGAAG CCGAAGGGCT GCTGGCGGTA TGCGTGCAGC ACGAGTTCGA TCACCTCAAC
GGCAAGCTGT TCGTCGACTA CCTGTCGCAG CTCAAGCGCG ACCGGATCAA GAAGAAGCTG
GAAAAGCAGC ACCGCCAGCA AGCCTGA
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| Protein sequence | MAILNILEFP DPRLRTIAKP VTEFDDALRQ LIDDMFETMY EAPGIGLAAT QVNVHKQIVV
MDLSEDRSEP RVFINPSVEE LTHDMGQYQE GCLSVPGFYE NVDRPLRVRV KAQDRDGKPF
ELEAEGLLAV CVQHEFDHLN GKLFVDYLSQ LKRDRIKKKL EKQHRQQA
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