| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0085 |
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| Symbol | |
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| ID | 6109255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 92867 |
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| End bp | 94177 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641619841 |
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| Product | sun protein |
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| Protein accession | YP_001746960 |
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| Protein GI | 170719272 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.273968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000000136476 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCCAC GCCTCGCCGC CGCCCGTGCC TTGGCCGCTG TGCTCAGTGG CAAGGCCTCG
CTGAACAGCT CGCTGCCTGC GCAACTGGAC AAGGTCGATG AACGCGACCG CGGCCTGACC
CAGGACCTGG CGTTCGGTAC CGCCCGCTGG CAGCCACGCC TGGACCTGCT CGCAGCCCAG
CTGCTGCAGA AGCCATTCAA GGCCGCTGAT GCCGATGTAC AGGCACTGCT GCTGATAGGC
CTGTACCAGT TGTTCTACAC GCGCATCCCG GCCCACGCCG CCATCGGCGA GACAGTCGGT
TGCGCCGACA AGCTGAAAAA ACCGTGGGCC AAGGGCCTGC TCAACGCCGT GCTGCGCCGC
GCCCAACGTG AAGGCGAGGC ACTGCTCGCC GGCATGGAAC GCGACCCGGT TGTACGCACC
GCCCACCCAC GCTGGCTGCA GAAAGCCCTC AAGGCGTTCT GGCCCGAGCA GTGGGAAGCC
ATTTGCGCGG CCAACAACGC TCACCCGCCG ATGATCCTGC GGGTCAACCG CCGCCACCAC
AGCCGCGATG CCTACCTTGC CCTGCTGACC GAAACCGGCG TTGGCGCCAG CGCCTGCCAG
TTCAGCCGCG ACGGCATTGT GCTGACTGAG GCCTGCGACG TGCGCAGCCT GCCGGGCTTT
GCCGAGGGCT GGGTGAGCGT TCAGGACGAA GCCGCGCAGC TGTCGGCCGA CCTGCTTGAA
CTGGCCCCCG GCCAGCGCGT GCTCGATGCC TGCTGCGCTC CAGGCGGCAA GACGTGCCAC
CTGCTCGAGG CAGAAGCGGG CCTGGGACAC CTGGTGGCCA TCGACCTGGA AGCCAAGCGC
CTGACCCGGG TGCGCGAGAA CCTCGAACGC CTGCAGCTGG ATGCCGAACT GATCGCCTGC
GACGCCCGTG ACACCGCCAG CTGGTGGGAC GGCAAGCCGT TCCAGCGCAT CCTGCTCGAC
GCGCCCTGCT CGGCTACCGG CGTCATTCGC CGCCACCCGG ACATCAAGCT GACCCGCCAG
GCTGACGACA TTCCGGCGCT GGCCGCGCTG CAGGGCGAGT TGCTCGATGC CCTGTGGCCG
ACCCTGGAGG TGGGCGGCAT GCTGCTGTAC GCCACCTGCT CCAGCCTGCC GACCGAGAAC
ACCGAAGTGA TCGGGGCCTT CCTTGCCCGC ACACCGGGCG CCCGTGAGCT GGACCTGGCC
ACCGAAGCTG GTATCCGCCA GCCCCATGGT CGCCAGCTGC TGGCCCAGGA AGGCGGCCAT
GACGGTTTCT ACTATGCCAA GCTGATCAAG ATCGCCGCCT CGCGCGGTTA A
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| Protein sequence | MNPRLAAARA LAAVLSGKAS LNSSLPAQLD KVDERDRGLT QDLAFGTARW QPRLDLLAAQ
LLQKPFKAAD ADVQALLLIG LYQLFYTRIP AHAAIGETVG CADKLKKPWA KGLLNAVLRR
AQREGEALLA GMERDPVVRT AHPRWLQKAL KAFWPEQWEA ICAANNAHPP MILRVNRRHH
SRDAYLALLT ETGVGASACQ FSRDGIVLTE ACDVRSLPGF AEGWVSVQDE AAQLSADLLE
LAPGQRVLDA CCAPGGKTCH LLEAEAGLGH LVAIDLEAKR LTRVRENLER LQLDAELIAC
DARDTASWWD GKPFQRILLD APCSATGVIR RHPDIKLTRQ ADDIPALAAL QGELLDALWP
TLEVGGMLLY ATCSSLPTEN TEVIGAFLAR TPGARELDLA TEAGIRQPHG RQLLAQEGGH
DGFYYAKLIK IAASRG
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