| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0079 |
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| Symbol | glyS |
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| ID | 6109249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 86475 |
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| End bp | 88526 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641619835 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001746954 |
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| Protein GI | 170719266 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.248487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000000235888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTGCTC AAGATTTCCT GGTAGAACTG GGCACCGAAG AGCTGCCACC CAAAGCCCTG
GCCACCCTTG GTGACGCCTT CCTGGCCGGC ATCGAAAAAG GCCTGCAGGC CGCAGGCCTG
AACTACACCG GTAAACAGGT GTACGCCGCG CCGCGTCGTC TGGCCGTGCT GATTCGCCAG
CTGGATGTAC AGCAGCCTGA CCGCAGCATC AATATCGACG GCCCGCCCCT GCAGGCTGCC
TTCAAGGACG GCGAGCCGAC CCAGGCTGCC TTGGGCTTTG CCAAGAAATG CGGGGTAGAG
CTGTCGGAAA TCGACCAGAG TGGCGCCAAG CTGCGCTTCT CCCAGCATAT CCCGGGCAAG
GCCACCGCCA GCCTGCTGCC GACCATCGTC GAAGATTCGC TCAACGACCT GCCGATCCCC
AAGCGCATGC GCTGGGCCGC CAGCCGTGAA GAGTTCGTAC GCCCGACCCA GTGGCTGGTG
ATGCTGCTGG GCGATCAGGT CGTCGACTGC ACCATCCTGT CGCAGCAGGC AGGCCGTGAA
TCCCGTGGGC ACCGCTTCCA CCATCCGCAA AACGTGGTCA TCACCACCCC GGCCAACTAC
GTCGAAGACC TGCGCAAAGC CTACGTGCTG GCCGACTTCG CCGAGCGCCG CGAACTGATT
GCCAAGCGCA CCACCGAACT GGCAATGCAG CAGGAAGGTA CTGCGATCGT GCCGCCAGCG
CTGCTGGATG AGGTGACTGC GCTGGTCGAG TGGCCGGTAC CGCTGGTGTG CTCGTTCGAG
GAGCGTTTCC TCGAGGTGCC GCAGGAAGCC TTGATCACCA CCATGCAGGA CAACCAGAAG
TACTTCTGCC TGCTGGACAG CGAAGGCAAG CTGCTGCCGC GCTTCATTAC CGTGGCCAAC
GTCGAAAGCC GTGACCCCAA GCAGATCGTC TCGGGTAACG AGAAAGTCGT GCGCCCGCGC
CTGACCGACG CCGAGTTCTT CTTCAAGCAG GACAAGAAGC AGCCGCTCGA AACCTTCAAC
GAACGCCTGA AGAACGTAGT CTTCCAGGCG CAGTTGGGCA CCGTCTACGA CAAGGCCGAG
CGCGTATCCC GGCTTGCCGC GTACATTGCT CCGCTGATCG GCGGTGACGC CCAGCGCGCT
GGCCGTGCCG GGCTGCTGTC CAAGTGCGAC CTGGCCACCG AAATGGTCGG CGAATTCCCA
GAGATGCAGG GCGTTGCCGG TTACTACTAC GCGCTCAACG ACGGCGAACC GCAAGACGTC
GCCTTGGCGC TGAACGAGCA GTACATGCCG CGCGGTGCTG GCGCCGAGCT GCCGCAGACC
CTGACCGGTG CTGCGGTGGC CATCGCCGAC AAACTCGACA CCCTGGTCGG TATCTTCGGC
ATCGGCATGC TGCCCACCGG CAGCAAAGAC CCGTACGCCT TGCGCCGCGC GGCCCTGGGC
GTGCTGCGTA TCCTGATCGA GAAGCAACTG GACCTGGACC TGACCCCTGC GGTCGAGTTC
GCAGTCAAGC AGTTCGGTGC CAAGGTCAAG GCCGCCGGCC TGGCCGAGCA GGTGCTGGAG
TTCATCTTCG ACCGCCTGCG TGCGCGCTAT GAAGACGAAG GCATCGACGT TGCCACCTAC
CTGTCGGTAC GTGCCCTGAA GCCGGGTTCT GCCTTGGACT TCGACCAGCG CGTGCAGGCC
GTGCAGGCCT TCCGCAAGCT GCCGGAAGCC GAGGCGCTGG CCGCAGTGAA CAAGCGTGTG
TCGAACCTGC TGAGCAAAGC CGAAGGCGCC ATTGCCGAAC AGGTCGAGCC GAAGTACTTC
GACAACGCCA ACGAGTTCTC GCTGTATTCG GCCATCCAGC AGGCCGACCA GGCTGTGCAA
CCGATGGCAG CCGCACGTCA GTACAGCGAA TCGCTGGCCC GCCTGGCGGC CCTGCGTGAC
CCGGTCGACG CCTTCTTCGA GGCAGTGATG GTCAACGCCG AGGACGCCAA GGTTCGCGCC
AACCGTTATG CCCTGCTCAG CCGCCTGCGC GGCCTGTTCC TGGGCGTTGC CGACATTTCG
CTGCTGGGGT AA
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| Protein sequence | MSAQDFLVEL GTEELPPKAL ATLGDAFLAG IEKGLQAAGL NYTGKQVYAA PRRLAVLIRQ
LDVQQPDRSI NIDGPPLQAA FKDGEPTQAA LGFAKKCGVE LSEIDQSGAK LRFSQHIPGK
ATASLLPTIV EDSLNDLPIP KRMRWAASRE EFVRPTQWLV MLLGDQVVDC TILSQQAGRE
SRGHRFHHPQ NVVITTPANY VEDLRKAYVL ADFAERRELI AKRTTELAMQ QEGTAIVPPA
LLDEVTALVE WPVPLVCSFE ERFLEVPQEA LITTMQDNQK YFCLLDSEGK LLPRFITVAN
VESRDPKQIV SGNEKVVRPR LTDAEFFFKQ DKKQPLETFN ERLKNVVFQA QLGTVYDKAE
RVSRLAAYIA PLIGGDAQRA GRAGLLSKCD LATEMVGEFP EMQGVAGYYY ALNDGEPQDV
ALALNEQYMP RGAGAELPQT LTGAAVAIAD KLDTLVGIFG IGMLPTGSKD PYALRRAALG
VLRILIEKQL DLDLTPAVEF AVKQFGAKVK AAGLAEQVLE FIFDRLRARY EDEGIDVATY
LSVRALKPGS ALDFDQRVQA VQAFRKLPEA EALAAVNKRV SNLLSKAEGA IAEQVEPKYF
DNANEFSLYS AIQQADQAVQ PMAAARQYSE SLARLAALRD PVDAFFEAVM VNAEDAKVRA
NRYALLSRLR GLFLGVADIS LLG
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