| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0076 |
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| Symbol | |
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| ID | 6109246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 83316 |
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| End bp | 84935 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641619832 |
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| Product | general substrate transporter |
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| Protein accession | YP_001746951 |
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| Protein GI | 170719263 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00192863 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000000146156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGGATT ACATCCAAGA GCAGGGGGCG ACGGCGAGCA GCCCAAGCCG TCGTGAAGAA
CGCAAGATCA TTTTCGCGTC ATCCCTCGGG ACGGTTTTCG AGTGGTATGA CTTTTTTCTC
TACGGTGCGC TGGCGGCAGT GATCAGCAAG CAGTTCTTTG CTGGCGTCAA CGACACCACC
GCTTTCATCT TCGCCCTGAT GGCATTCGCC GCCGGCTTCC TGGTACGGCC CTTCGGCGCG
CTGGTTTTCG GCCGGCTGGG TGACATGATC GGGCGAAAAT ACACCTTCCT GATCACCATC
GTGCTGATGG GCTTGTCCAC CTTCGCCGTT GGTTTACTGC CTACCTATGC AAGCATCGGT
ATTGCCGCGC CTATCATCCT GGTGGTACTG CGCATGCTGC AGGGGCTGGC GCTGGGGGGC
GAGTATGGTG GCGCGGCGAC GTATGTGGCC GAACACGCAC CGCCCGGCAA GCGCGGCTTC
CACACGGGCT TCATCCAGTC CACCGCTACC CTGGGGCTGC TGTTGTCGTT GCTGGTGGTG
CTGGGCAGCC GCTACATCAC CGGCGATCAG TTCGAAACCT GGGGCTGGCG CTTGCCGTTC
CTGCTGTCGA TCGTGCTGCT GGGCATTTCC ACCTGGATCC GCATGAGCAT GCACGAGTCG
CCGGCCTTCG TGAAAATGAA GGCCCAGGGC AAGGTCAGCA AGTCGCCTAT CCGCGAGTCG
TTCACCTCTT GGCCAAACCT CAAGGTGGTG CTCACCGCAC TATTCAGCAT CAACGCCGGC
CAGGCCGTGA CGTTCTACAC GGCGCAGTTC TACGTGCTGT TCTTCATGAC CCAGATGCTC
AAGATGGATC CGGCCCAGGC CAATACCTTG CTGATCATCA GCGTGGTGAT CGGCGCGCCG
TTCTTCGTAT TCTTCGGCTG GCTGTCCGAC CGCATCGGCC GCAAGCCTAT CCTGATGCTC
GGCCTGCTGC TGGCCACGGT GTTGTACTTC CCGCTGTTCA AGGCCCTCAG CCACTACGCC
AACCCGCAGA TCGACGCAGC GAGCCGTCAG GCGCCGATCG TGGTCACCGC TGACCCGCAA
GGTTGTACCT TCCAGTTCGA CCCGGTCGGC AAGGCGCGTT TCGACAGCCC GTGCGACAAG
GTCAAGACCT TCCTGGTCAA ACAGGGCCTG CCGTACAGCT CGGTGAATGT GGCGGGCAGC
CAAGTGGTGG TGAACATTGG CGACAAGACC ATCAACGGAT TTGACGAAAC AGCCATGCGC
ACAGCCATCG AGCAGGCAGG CTACCCGGCC AAGGCGGATC CGTCGCAGGT CAACCAGGTG
ATGGTGGTGG TGTTGATCGT TGCAATGATC CTGATCGCAA CCATGACCTA TGGGCCGCTG
GCGGCGGTAA TGGTGGAGCT GTTCCCGACG CGTATCCGCT ATACGTCTAT GTCGCTGCCC
TATCACATTG GCAATGGCTG GTTTGGCGGT TTCCTGCCCA CGGTTTCGTT CGCGCTGGTG
GTGTACACCG GGGATATCTT CTACGGCTTG TGGTACCCGG TGTTGGTAAC CGGGATCAGC
CTGGTGGTGG GAATCTTCTG CCTGAAAGAA ACCAGGGATG TGGATATCGA CAAGGTCTGA
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| Protein sequence | MSDYIQEQGA TASSPSRREE RKIIFASSLG TVFEWYDFFL YGALAAVISK QFFAGVNDTT
AFIFALMAFA AGFLVRPFGA LVFGRLGDMI GRKYTFLITI VLMGLSTFAV GLLPTYASIG
IAAPIILVVL RMLQGLALGG EYGGAATYVA EHAPPGKRGF HTGFIQSTAT LGLLLSLLVV
LGSRYITGDQ FETWGWRLPF LLSIVLLGIS TWIRMSMHES PAFVKMKAQG KVSKSPIRES
FTSWPNLKVV LTALFSINAG QAVTFYTAQF YVLFFMTQML KMDPAQANTL LIISVVIGAP
FFVFFGWLSD RIGRKPILML GLLLATVLYF PLFKALSHYA NPQIDAASRQ APIVVTADPQ
GCTFQFDPVG KARFDSPCDK VKTFLVKQGL PYSSVNVAGS QVVVNIGDKT INGFDETAMR
TAIEQAGYPA KADPSQVNQV MVVVLIVAMI LIATMTYGPL AAVMVELFPT RIRYTSMSLP
YHIGNGWFGG FLPTVSFALV VYTGDIFYGL WYPVLVTGIS LVVGIFCLKE TRDVDIDKV
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