Gene PputW619_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0047 
Symbol 
ID6109217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp50256 
End bp51674 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content57% 
IMG OID641619803 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001746922 
Protein GI170719234 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0750608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.18051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCAT TCAGCCTGGC TGCAAAGCTG GGGTTAAAAG TTGGGTTGAT GAGCGCAGCG 
TTGCTGCTTC TGTTCGCCAC CTTTGGCTAT CTGATGGTAG GCAAGGCTCT GGAAAGAAAT
GCCAGAGCAG ACCTGGAAGT AAAGATGGCG GGGATGGCTC ACAACCTGTC CACCATCCCG
GACATCTCCG GCGTCAACGC GGATGCGCAT CAGCTTGTCG ATTTGGTCAT GGGCCACAAC
AACCTGTATG TGAGCATATT CGATACCTCA CAGAATCAGA CTCCCCTGCT CTCGATTGGC
TCGAAACAGG TCAATCTGGA GGTGCACAAG TTTCAGCCGG CGGCCCAGCC CAAAGAGCAC
GAATGGCGTG ATACGCAGGA CCGTCCTCTG CTGAGTGCTT CTCGAATCAT GCGTTTGGGC
GATGGAACAG AGGTCAGCGT CTATATGACC ATGGACCAGT CATCCAGTGA GGCGCTGCTC
GATGCGTTGC TGACCTGGGC CTTGATGATG TCCCCCGTCA TCCTCGCACT GATCTTGGCC
ATTGGCTGGT GGACTGTGCG CAGAGGCCTG CTACCACTGA CCAAGTTCCT CAAGATCGCC
TCGAAAATCT CAACCGAGAG CCTCGACCAT CGCCTTCCAA CTGATGGGAT GCCGGCAGAA
CTCAAAATGC TCGCCGACGG CATCAACATC ATGCTGGCTC GCCTGGATGA TGGGGTTCAG
CAGCTCTCGC AGTTTTCTGA CGACCTTGCT CACGAACTTC GAGCACCGCT TTCCAACCTG
ATGGGCAAGG CCCAGGTTGC CTTGACCAGA GAACGATCGC TTTCCGAGTA CCGGGAGGTT
CTGGAGTCGT GCACAGAAGA GCTGGACCGC ATGAGCCGCA TGGTTTCCGA CATGCTGTTC
TTGGCCCAGG TCAGTCATCC AGCATCAATG GTGGAGTTCG AATCCGTCTC CTTGGTCGAC
GAGGTTCAGC GAGTGTGCGA GCTCTTCAGC ATTTCAGCAG AAGAAGGCGA GATTCAGCTG
CAGATCTCCG GCAGTGATGA CGTGGTGCGC GGGAATCGCC TGATGGTTCA ACGTGCCGTC
TCGAATCTGG TCTCGAACGC GATCCGTTAC TGCCCTCGCG GCCGCACGGT CTACGTTAAG
GTGCAGCATA GTGCGAGCGG TACGACGTTG AGTGTCGGCA ACCCCGGCCG TGGTATTGCC
AAGGAACACC ACGCGCACTT GTTTGAGCGG TTCTACCGTG TGGACAAGAG CCGAGCACGG
AGCGAAGGCG GTACCGGTCT TGGCTTGGCC ATTGTGCAGT CGATCATGAG TCTGCACCAG
GGATCGGCGA GCGTGGAGGT GACCGAAGAA AACTTCACCT GGTTCCACCT TCACTTTCCG
GAAGCCCAGC AAATGCAGCC GGCAATGACC GCCGCTTAA
 
Protein sequence
MRPFSLAAKL GLKVGLMSAA LLLLFATFGY LMVGKALERN ARADLEVKMA GMAHNLSTIP 
DISGVNADAH QLVDLVMGHN NLYVSIFDTS QNQTPLLSIG SKQVNLEVHK FQPAAQPKEH
EWRDTQDRPL LSASRIMRLG DGTEVSVYMT MDQSSSEALL DALLTWALMM SPVILALILA
IGWWTVRRGL LPLTKFLKIA SKISTESLDH RLPTDGMPAE LKMLADGINI MLARLDDGVQ
QLSQFSDDLA HELRAPLSNL MGKAQVALTR ERSLSEYREV LESCTEELDR MSRMVSDMLF
LAQVSHPASM VEFESVSLVD EVQRVCELFS ISAEEGEIQL QISGSDDVVR GNRLMVQRAV
SNLVSNAIRY CPRGRTVYVK VQHSASGTTL SVGNPGRGIA KEHHAHLFER FYRVDKSRAR
SEGGTGLGLA IVQSIMSLHQ GSASVEVTEE NFTWFHLHFP EAQQMQPAMT AA