Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0040 |
Symbol | |
ID | 6109210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 42765 |
End bp | 43496 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641619796 |
Product | hypothetical protein |
Protein accession | YP_001746915 |
Protein GI | 170719227 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.28336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGAACC CATTCGGGAA ACATGCTACT AAGAGCATTC GCGGCATCGC TCCATTTGAT AGTGAGGCCC GTAACGATTG CCCGTACTTC AAGCCTCGCC AGCATAAGAA AACAGAACGA AAAACCAGGT TTGACGGCGT CCCGCGGAAG ATTCTCAAGC TATTGATCGA ACAGTTCGAT CGCGTGGTTT ACATCCTGGA GAAAGAGACC CAACTGGTCC TTTCCGAGAA CGCGTTGAGA GGCATGCTGC AGCGTTACAA GGGAGAGCGT GGCTACCTCT ATACCGGCGC GACGCTTCGC AATGTGCCAT GGATCTTTGC TTACATGTCG GACGCCACCC GCCTGTTTGG CCAGAAGGTC AGTGGAAATG CTGAGCTGGT GAAAGCTATT GCCGCTGAGG TGCCGGGGGC GGAAATCAGC AGCACTGGTC GGCTGGAATC GAAGAAGGTG CCTGGTTCGA AGGCGGCATA TTTTGATCTC AAAATGAGTT TCATCCGCCA TCGAATCGTC AAAGACAGTG AAGCGTCTGG CTTGGTTGAA AGCATGGAGT TTGTAGTGTC ACAGCCTCGC GGAGGTGAGC TTGAGCACAT TCACAAGGAA GTCATCAAAT TCGATTCGGC TTGGTTCGAA TCTCTTATCC GGATGCCGGT TGATCATCCT TATCGCAGAA TGGATAGAGT GAAGATGGCC CGGGAGGAAC TGGGCGATCT GCTGGAGCTG ACTCAGGCCT GA
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Protein sequence | MKNPFGKHAT KSIRGIAPFD SEARNDCPYF KPRQHKKTER KTRFDGVPRK ILKLLIEQFD RVVYILEKET QLVLSENALR GMLQRYKGER GYLYTGATLR NVPWIFAYMS DATRLFGQKV SGNAELVKAI AAEVPGAEIS STGRLESKKV PGSKAAYFDL KMSFIRHRIV KDSEASGLVE SMEFVVSQPR GGELEHIHKE VIKFDSAWFE SLIRMPVDHP YRRMDRVKMA REELGDLLEL TQA
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