Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0033 |
Symbol | |
ID | 6109203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 37235 |
End bp | 38023 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641619789 |
Product | silent information regulator protein Sir2 |
Protein accession | YP_001746908 |
Protein GI | 170719220 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.483046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATT TGCAAAGAGC TGCTGAGGCT TTGCGCAGGT CCAAGAGGGT CGTTTTTTTC ACGGGTGCTG GCATCTCTGC TGACAGCGGA ATTCCGACCT TCCGCGACAA GCTGACAGGC CTCTGGGCGA AGCATGACCC TCAGCGTCTC GAAACAGCGG ACGCCTTTCG CAAAAATCCA GCTCTCGTCT GGAGCTGGTA TCTTTGGCGC CGGCAGCAGG TTGGCCAGGC CAAACCTAAC TTGGCTCATC TATCTATTCC ACGGATAGCT GATGCTGGCT GGAACGTATC TGTCGTTACC CAGAATATTG ATGATCTGCA TGAACGAGCC GGCTCCAGTT CGGTGATACA CCTTCATGGC CGCTTGATGG ACGTGAAATG CTTCGGATGC CACCGGCCAG CAGAGTTATC ACCAGATCAA CTGGCGGTTC CCCCGGCGGG ACAGATGATC GAGCCTCCGC GGTGCACTCG ATGCAACGGG AGGTTGCGCC CTGGGGTGGT CTGGTTCAGA GAGAATCTTC CAGAGGATGC GTGGCGTTCA GCAGTAAGGC TTGTGGAAGC CTGTGACTTG CTGATTTCGG TGGGTACATC TGGCGTAGTC ATGCCGGCAG CCGGTATTCC AGATATGGCT CTGGCGGCCG GGGCAACCGT GATCCATGTG AACCTTGACG ACGTGGGGAT GGACGGGGCG GAAGAGATAA TGCTCGTTGG GCCTGCAGGG GTGGTATTAC CCGCTTTGCT TCAAGCCGCA GGAGTTGCAG GTCCGTTGCA GCTTGATGGT TTTACTTAA
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Protein sequence | MSNLQRAAEA LRRSKRVVFF TGAGISADSG IPTFRDKLTG LWAKHDPQRL ETADAFRKNP ALVWSWYLWR RQQVGQAKPN LAHLSIPRIA DAGWNVSVVT QNIDDLHERA GSSSVIHLHG RLMDVKCFGC HRPAELSPDQ LAVPPAGQMI EPPRCTRCNG RLRPGVVWFR ENLPEDAWRS AVRLVEACDL LISVGTSGVV MPAAGIPDMA LAAGATVIHV NLDDVGMDGA EEIMLVGPAG VVLPALLQAA GVAGPLQLDG FT
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