Gene PputW619_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0033 
Symbol 
ID6109203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp37235 
End bp38023 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content57% 
IMG OID641619789 
Productsilent information regulator protein Sir2 
Protein accessionYP_001746908 
Protein GI170719220 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.483046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATT TGCAAAGAGC TGCTGAGGCT TTGCGCAGGT CCAAGAGGGT CGTTTTTTTC 
ACGGGTGCTG GCATCTCTGC TGACAGCGGA ATTCCGACCT TCCGCGACAA GCTGACAGGC
CTCTGGGCGA AGCATGACCC TCAGCGTCTC GAAACAGCGG ACGCCTTTCG CAAAAATCCA
GCTCTCGTCT GGAGCTGGTA TCTTTGGCGC CGGCAGCAGG TTGGCCAGGC CAAACCTAAC
TTGGCTCATC TATCTATTCC ACGGATAGCT GATGCTGGCT GGAACGTATC TGTCGTTACC
CAGAATATTG ATGATCTGCA TGAACGAGCC GGCTCCAGTT CGGTGATACA CCTTCATGGC
CGCTTGATGG ACGTGAAATG CTTCGGATGC CACCGGCCAG CAGAGTTATC ACCAGATCAA
CTGGCGGTTC CCCCGGCGGG ACAGATGATC GAGCCTCCGC GGTGCACTCG ATGCAACGGG
AGGTTGCGCC CTGGGGTGGT CTGGTTCAGA GAGAATCTTC CAGAGGATGC GTGGCGTTCA
GCAGTAAGGC TTGTGGAAGC CTGTGACTTG CTGATTTCGG TGGGTACATC TGGCGTAGTC
ATGCCGGCAG CCGGTATTCC AGATATGGCT CTGGCGGCCG GGGCAACCGT GATCCATGTG
AACCTTGACG ACGTGGGGAT GGACGGGGCG GAAGAGATAA TGCTCGTTGG GCCTGCAGGG
GTGGTATTAC CCGCTTTGCT TCAAGCCGCA GGAGTTGCAG GTCCGTTGCA GCTTGATGGT
TTTACTTAA
 
Protein sequence
MSNLQRAAEA LRRSKRVVFF TGAGISADSG IPTFRDKLTG LWAKHDPQRL ETADAFRKNP 
ALVWSWYLWR RQQVGQAKPN LAHLSIPRIA DAGWNVSVVT QNIDDLHERA GSSSVIHLHG
RLMDVKCFGC HRPAELSPDQ LAVPPAGQMI EPPRCTRCNG RLRPGVVWFR ENLPEDAWRS
AVRLVEACDL LISVGTSGVV MPAAGIPDMA LAAGATVIHV NLDDVGMDGA EEIMLVGPAG
VVLPALLQAA GVAGPLQLDG FT