Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0015 |
Symbol | |
ID | 6109185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 16867 |
End bp | 18825 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641619771 |
Product | CopA family copper resistance protein |
Protein accession | YP_001746890 |
Protein GI | 170719202 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2132] Putative multicopper oxidases |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.275431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGCA AAACCACGAG ACGTTCATTC GTCAAAGGCC TGGCTGCTAC CGGACTACTG GGTGGGCTGG GCATGTGGCG CGCGCCGGTC TGGGCCGTAA CCAGCCCTGG CCAGCCTAAC GTACTGACCG GCACCGATTT TGACCTGTAC ATCGGGGAGC TCCCGGTGAA CATTACCGGG GCAGCTCGAA CGGCGATGGC CATCAACGGT TCGCTGCCAG GACCAATACT CCGTTGGCGC GAAGGCGACA CGGTCACGCT ACGGGTTCGC AACCGCTTGA AGCAGGACAC GTCCATCCAC TGGCACGGCA TCATCCTGCC GGCGAATATG GACGGCGTGC CGGGTCTAAG CTTCCATGGC ATCGCTCCCG ACGGCATGTA CGAGTACAAG TTCAAGGTCC ACCAGAACGG CACCTACTGG TACCACAGCC ATTCGGGCTT CCAGGAGCAG GTCGGTGTTT ACGGTGCGCT GGTGATTGAT GCCAAGGATC CAGAGCCTTT CACCTACGAT CGTGACTATG TCGTCATGCT GAGTGATTGG ACCGACGAAG ACCCGGCGCG GGTTATGTCC AAGCTCAAAA AACAGTCGGA CTATTACAAC TTCCACAAGC GCACCGTTGG CGACTTCGTC GACGACGTGA GCGAGAAAGG TTGGTCTGCT GCTGTGGCCG ATCGAAAGAT GTGGGCCGAG ATGAAGATGA GCCCAACCGA TCTCGCTGAC GTGAGCGGGC ACACCTACAC CTACCTCATG AACGGCCAGG CGCCAAATGG GAACTGGACG GGAATCTTCA AGCCAGGGGA GAAAATCCGG CTTCGCTTTA TCAATGGCTC GGCGATGACC TATTTCGACG TGCGGATCCC CGGCTTGAAA ATGACGGTTG TCGCAGCCGA CGGTCAGTAC GTTAAGCCAG TGTCGATCGA TGAATTCCGG ATTGCCGTTG CTGAAACCTA CGATGTCATT GTCGAGCCTG AAAACGAGCA GGCTTACACC ATCTTTGCTC AATCCATGGA TCGCACCGGC TATTCAAGGG GTACCTTGGC TGTCCGTGAG GGCCTGCAGG CACCGGTGCC GGCTGTAGAT CCAAGGCCTC TCATCTCCAT GAGTGATATG GGGATGGACC ACGGCAGCAT GGGTGGCATG GATCACGGCA GCATGGCCGG TATGGACCAC AGCAAGATGG CTGGCATGGA CCACGGCAGC ATGGCCGGTA TGGACCATAG CAAGATGGCT GGCATGGACC ACGGCAGCAT GGCCGGTATG GACCATAGCA AGATGGCTGG CATGGACCAC GGCAGCATGG CCGGTATGGA CCATAGCAAG ATGGCTGGCA TGGACCACGG CAGCATGGCC GGTATGGACC ATAGCAAGAT GGCTGGCATG GACCACGGCA ACATGACCGG TATGGACCAA AGCAATATGG CCGCCAGCGG TGCCATGCAG AACCATCCCG CCTCCGAAAC AAACAACCCT CTGGTCGATA TGCAGACCAT GACCCCTACG CCAAAGCTGA GCGATCCGGG GATCGGGCTT CGCGATAACG GGCGTCGGGT TCTCACGTAT TCGGATTTGC GTAGCACCTT CATCGACCCT GACGGCCGGG AACCTGGCCG GACAATCGAA CTGCACCTTA CCGGGCATAT GGAAAAGTTC GCTTGGTCCT TCGATGGGAT CAAGTTTTCT GACGCAGAGC CGCTGCGGCT CAAGTACGGC GAGCGCCTGC GTATTACCTT GGTCAACGAC ACCATGATGA CTCACCCCAT CCATCTGCAC GGCATGTGGA GTGACCTGGA GGATGAGGAC GGCAATTTCA TGGTGCGAAA ACACACGATC GATATGCCGC CTGGCTCGAA ACGAAGCTAT CGCGTAACCG CAGATGCACT CGGGCGCTGG GCCTATCACT GTCACCTCAT GTACCACATG GAGATGGGCA TGTTCCGAGA AGTCCGCGTG GACGAATGA
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Protein sequence | MQSKTTRRSF VKGLAATGLL GGLGMWRAPV WAVTSPGQPN VLTGTDFDLY IGELPVNITG AARTAMAING SLPGPILRWR EGDTVTLRVR NRLKQDTSIH WHGIILPANM DGVPGLSFHG IAPDGMYEYK FKVHQNGTYW YHSHSGFQEQ VGVYGALVID AKDPEPFTYD RDYVVMLSDW TDEDPARVMS KLKKQSDYYN FHKRTVGDFV DDVSEKGWSA AVADRKMWAE MKMSPTDLAD VSGHTYTYLM NGQAPNGNWT GIFKPGEKIR LRFINGSAMT YFDVRIPGLK MTVVAADGQY VKPVSIDEFR IAVAETYDVI VEPENEQAYT IFAQSMDRTG YSRGTLAVRE GLQAPVPAVD PRPLISMSDM GMDHGSMGGM DHGSMAGMDH SKMAGMDHGS MAGMDHSKMA GMDHGSMAGM DHSKMAGMDH GSMAGMDHSK MAGMDHGSMA GMDHSKMAGM DHGNMTGMDQ SNMAASGAMQ NHPASETNNP LVDMQTMTPT PKLSDPGIGL RDNGRRVLTY SDLRSTFIDP DGREPGRTIE LHLTGHMEKF AWSFDGIKFS DAEPLRLKYG ERLRITLVND TMMTHPIHLH GMWSDLEDED GNFMVRKHTI DMPPGSKRSY RVTADALGRW AYHCHLMYHM EMGMFREVRV DE
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