Gene EcSMS35_4948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4948 
Symbol 
ID6146001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp5062258 
End bp5062731 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content49% 
IMG OID641619751 
Producthypothetical protein 
Protein accessionYP_001746855 
Protein GI170682862 
COG category[S] Function unknown 
COG ID[COG3045] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACA AGCATTTGAT CCTGTCTTTA AGCCTGATAA TGCTGGGGCC ATTGGCTCAT 
GCAGAAGAGA TTGGTTCGGT CGACACCGTA TTTAAAATGA TCGGCCCGGA TCACAAAATT
GTTGTGGAAG CCTTTGATGA TCCCGATGTG AAAAATGTCA CCTGTTATGT GAGCCGGGCG
AAAACCGGTG GTATTAAAGG GGGATTGGGT CTGGCGGAAG ATACCTCCGA TGCGGCCATT
TCTTGTCAGC AAGTCGGGCC GATTGAACTG TCGGATCGTA TTAAAAACGG CAAAGCTCAG
GGCGAGGTAG TATTCAAAAA ACGTACGTCC CTGGTCTTTA AGTCGTTACA GGTCGTGCGC
TTTTATGACG CTAAACGCAA CGCGCTCGCT TATCTGGCTT ACTCCGACAA AGTTGTAGAA
GGTTCGCCGA AAAACGCGAT TAGCGCGGTT CCTGTCATGC CGTGGCGGCA ATAA
 
Protein sequence
MKYKHLILSL SLIMLGPLAH AEEIGSVDTV FKMIGPDHKI VVEAFDDPDV KNVTCYVSRA 
KTGGIKGGLG LAEDTSDAAI SCQQVGPIEL SDRIKNGKAQ GEVVFKKRTS LVFKSLQVVR
FYDAKRNALA YLAYSDKVVE GSPKNAISAV PVMPWRQ