Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4938 |
Symbol | radA |
ID | 6145908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 5052799 |
End bp | 5054181 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641619741 |
Product | DNA repair protein RadA |
Protein accession | YP_001746845 |
Protein GI | 170681066 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.664332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAAAAG CTCCAAAACG CGCCTTTGTT TGTAATGAAT GCGGGGCCGA TTATCCGCGC TGGCAGGGGC AGTGCAGTGC CTGTCATGCC TGGAACACCA TCACCGAGGT GCGTCTTGCT GCGTCGCCAA CGGTGGCGCG TAACGAGCGT CTCAGTGGCT ATGCCGGTAG CGCCGGAGTG GCAAAAGTCC AGAAACTCTC CGACATCAGC CTTGAGGAGC TGCCGCGTTT TTCTACCGGA TTTAAAGAGT TCGACCGCGT ATTAGGCGGC GGGGTGGTGC CGGGAAGCGC CATTCTGATT GGCGGTAACC CAGGTGCGGG GAAATCCACG CTGCTGTTGC AAACGCTGTG CAAACTGGCC CAGCAGATGA AAACGCTGTA TGTCACCGGC GAAGAGTCGC TGCAACAGGT GGCAATGCGC GCTCATCGCC TTGGCCTGCC GACTGACAAT CTCAATATGT TGTCGGAAAC CAGCATCGAG CAGATCTGCC TGATTGCCGA AGAAGAGCAA CCGAAGCTGA TGGTAATTGA CTCCATCCAG GTGATGCATA TGGCGGATGT ACAATCATCG CCTGGCAGCG TGGCGCAGGT GCGTGAAACG GCGGCTTATC TGACGCGCTT CGCCAAAACG CGCGGTGTGG CGATTGTCAT GGTTGGGCAC GTAACCAAAG ATGGCTCGCT GGCTGGCCCT AAAGTGCTGG AACACTGTAT CGACTGTTCG GTGCTTCTGG ATGGCGATGC CGACTCCCGT TTTCGCACCT TACGCAGCCA TAAAAACCGC TTCGGCGCGG TGAATGAGCT GGGCGTCTTC GCAATGACCG AACAGGGTCT GCGTGAAGTC AGCAACCCTT CGGCAATCTT TTTAAGCCGC GGTGATGAAG TGACCTCGGG TAGCTCAGTG ATGGTAGTGT GGGAAGGAAC GCGTCCGCTG CTGGTGGAGA TTCAGGCGCT CGTCGATCAC TCGATGATGG CGAATCCACG CCGCGTGGCA GTCGGGCTGG AGCAAAACCG TCTGGCAATC CTGCTGGCGG TGCTTCACCG TCACGGTGGT CTACAAATGG CCGATCAGGA TGTGTTTGTT AACGTGGTCG GTGGCGTGAA GGTGACGGAA ACCAGCGCCG ACTTAGCGTT ACTGCTGGCG ATGGTTTCCA GCCTGCGCGA CAGACCGCTG CCGCAGGATC TGGTGGTGTT TGGTGAAGTC GGGCTGGCAG GGGAGATCCG CCCGGTGCCC AGCGGTCAGG AACGTATCTC AGAAGCGGCG AAACATGGTT TTCGGCGGGC GATTGTTCCG GCGGCTAACG TGCCGAAAAA AGCGCCGGAA GGGATGCAGA TTTTTGGCGT TAAAAAACTC TCCGACGCGC TTAGCGTGTT CGACGACTTA TAA
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Protein sequence | MAKAPKRAFV CNECGADYPR WQGQCSACHA WNTITEVRLA ASPTVARNER LSGYAGSAGV AKVQKLSDIS LEELPRFSTG FKEFDRVLGG GVVPGSAILI GGNPGAGKST LLLQTLCKLA QQMKTLYVTG EESLQQVAMR AHRLGLPTDN LNMLSETSIE QICLIAEEEQ PKLMVIDSIQ VMHMADVQSS PGSVAQVRET AAYLTRFAKT RGVAIVMVGH VTKDGSLAGP KVLEHCIDCS VLLDGDADSR FRTLRSHKNR FGAVNELGVF AMTEQGLREV SNPSAIFLSR GDEVTSGSSV MVVWEGTRPL LVEIQALVDH SMMANPRRVA VGLEQNRLAI LLAVLHRHGG LQMADQDVFV NVVGGVKVTE TSADLALLLA MVSSLRDRPL PQDLVVFGEV GLAGEIRPVP SGQERISEAA KHGFRRAIVP AANVPKKAPE GMQIFGVKKL SDALSVFDDL
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