Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4935 |
Symbol | lplA |
ID | 6143797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 5049988 |
End bp | 5051004 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641619738 |
Product | lipoate-protein ligase A |
Protein accession | YP_001746842 |
Protein GI | 170680705 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0095] Lipoate-protein ligase A |
TIGRFAM ID | [TIGR00545] lipoyltransferase and lipoate-protein ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.672461 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACAT TACGCCTGCT CATCTCTGAC TCTTACGACC CGTGGTTTAA CCTGGCGGTG GAAGAGTGTA TTTTTCGCCA GATGCCCGCC ACGCAGCGCG TTCTGTTTCT CTGGCGCAAT GCCGACACCG TGGTGATTGG TCGCGCACAG AACCCGTGGA AAGAGTGTAA TACCCGGCGG ATGGAAGAAG ATAACGTCCG CCTGGCGCGG CGCAGCAGCG GTGGCGGCGC GGTGTTCCAC GATCTCGGTA ATACCTGCTT TACCTTTATG GCTGGCAAGC CGGAGTACGA TAAAACTATC TCCACGTCGA TTGTGCTCAA TGCTCTGAAC GCGCTCGGCG TCAGCGCCGA AGCGTCCGGC CGTAACGATC TGGTGGTGAA AACCGCCGAA GGCGACCGCA AAGTCTCAGG CTCAGCCTAT CGCGAAACTA AAGATCGCGG CTTCCATCAT GGCACCTTGC TACTCAATGC TGACCTTAGC CGTCTGGCAA ACTATCTCAA CCCGGATAAA AAGAAACTGG CGGCGAAAGG CATTACGTCG GTACGTTCCC GCGTGACCAA CCTCACCGAG CTGCTGCCGG GGATCACCCA TGAGCAGGTT TGCGAGGCCA TAACCGAGGC CTTTTTCGCC CATTATGGCG AGCGCGTGGA AGCGGAAATC ATCTCCCCGG ACAAAACGCC AGACTTGCCG AACTTCGCCG AAACCTTTGC CCGTCAGAGT AGCTGGGAGT GGAACTTCGG TCAGGCTCCG GCGTTCTCGC ATCTGCTGGA TGAACGCTTC ACCTGGGGCG GCGTGGAACT GCATTTCGAC GTTGAAAAAG GCCATATCAC CCGCGCCCAG GTGTTTACCG ACAGCCTCAA CCCCGCACCT CTGGAAGCTC TCGCCGGGCG ACTGCAAGGC TGCCTGTACC GCGCGGATAT GCTGCAACAG GAGTGCGAAG CGCTGTTGGT TGACTTCCCG GAACAGGAAA AAGAGCTACG GGAGTTGTCG ACGTGGATAG CGGGGGCGGT AAGGTAA
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Protein sequence | MSTLRLLISD SYDPWFNLAV EECIFRQMPA TQRVLFLWRN ADTVVIGRAQ NPWKECNTRR MEEDNVRLAR RSSGGGAVFH DLGNTCFTFM AGKPEYDKTI STSIVLNALN ALGVSAEASG RNDLVVKTAE GDRKVSGSAY RETKDRGFHH GTLLLNADLS RLANYLNPDK KKLAAKGITS VRSRVTNLTE LLPGITHEQV CEAITEAFFA HYGERVEAEI ISPDKTPDLP NFAETFARQS SWEWNFGQAP AFSHLLDERF TWGGVELHFD VEKGHITRAQ VFTDSLNPAP LEALAGRLQG CLYRADMLQQ ECEALLVDFP EQEKELRELS TWIAGAVR
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