| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4931 |
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| Symbol | deoA |
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| ID | 6145192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 5046159 |
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| End bp | 5047481 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641619734 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001746838 |
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| Protein GI | 170682854 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTTTCTCG CACAAGAAAT TATTCGTAAA AAACGTGATG GTCATGCGCT GAGTGATGAA
GAAATTCGTT TCTTTATCAA CGGCATTCGC GACAACACTA TCTCCGAAGG GCAGATTGCC
GCCCTCGCGA TGACCATTTT CTTCCACGAT ATGACAATGC CTGAGCGTGT CTCGCTGACC
ATGGCGATGC GAGATTCAGG AACCGTTCTC GACTGGAAAA GCCTGCATCT GAATGGCCCG
ATTGTTGATA AACACTCGAC CGGCGGTGTC GGCGATGTGA CTTCGCTGAT GTTGGGGCCG
ATGGTCGCTG CCTGTGGCGG CTATATTCCG ATGATCTCCG GTCGCGGCCT CGGTCATACT
GGCGGTACGC TCGACAAACT GGAATCCATC CCTGGCTTCG ACATTTTCCC GGATGACAAC
CGTTTCCGCG AAATTATTAA AGACGTCGGC GTGGCGATTA TCGGTCAGAC CAGCTCACTG
GCTCCGGCGG ATAAACGTTT CTACGCGACC CGTGATATTA CCGCAACCGT GGACTCCATC
CCGCTGATCA CTGCCTCGAT CCTGGCGAAG AAACTGGCGG AAGGTCTGGA TGCGCTGGTG
ATGGACGTGA AAGTGGGTAG CGGCGCGTTT ATGCCGACCT ACGAACTTTC TGAAGCCCTT
GCCGAAGCGA TTGTTGGCGT AGCTAACGGC GCTGGCGTGC GTACCACCGC GCTGCTCACC
GATATGAATC AGGTACTGGC CTCCAGTGCA GGTAACGCGG TTGAAGTTCG TGAAGCGGTG
CAGTTCCTGA CGGGTGAGTA TCGTAACCCG CGTCTGTTTG ATGTCACAAT GGCGCTGTGC
GTAGAGATGC TTATCTCCGG CAAACTGGCG AAAGATGACG CCGAAGCGCG CGCGAAATTG
CAGGCGGTGC TGGACAACGG TAAAGCGGCA GAAGTCTTTG GTCGTATGGT AGCGGCACAA
AAAGGCCCGA CTGACTTCGT TGAGAACTAC GCGAAGTATC TGCCGACAGC GATGCTGACG
AAAGCAGTCT ATGCTGATAC CGAAGGGTTT GTCAGTGAAA TGGATACCCG CGCGCTGGGG
ATGGCAGTGG TTGCAATGGG CGGCGGACGC CGTCAGGCAT CTGACACCAT CGATTACAGC
GTCGGCTTTA CTGATATGGC GCGTCTGGGC GACCAGGTAG ACGGTCAGCG TCCGCTGGCA
GTTATCCACG CGAAAGACGA AAACAGCTGG CAGGAAGCGG CGAAAGCGGT GAAAGCGGCA
ATTAAACTTG CCGATAAAGC ACCGGAAAGC ACACCAACTG TCTATCGTCG TATCAGTGAA
TAA
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| Protein sequence | MFLAQEIIRK KRDGHALSDE EIRFFINGIR DNTISEGQIA ALAMTIFFHD MTMPERVSLT
MAMRDSGTVL DWKSLHLNGP IVDKHSTGGV GDVTSLMLGP MVAACGGYIP MISGRGLGHT
GGTLDKLESI PGFDIFPDDN RFREIIKDVG VAIIGQTSSL APADKRFYAT RDITATVDSI
PLITASILAK KLAEGLDALV MDVKVGSGAF MPTYELSEAL AEAIVGVANG AGVRTTALLT
DMNQVLASSA GNAVEVREAV QFLTGEYRNP RLFDVTMALC VEMLISGKLA KDDAEARAKL
QAVLDNGKAA EVFGRMVAAQ KGPTDFVENY AKYLPTAMLT KAVYADTEGF VSEMDTRALG
MAVVAMGGGR RQASDTIDYS VGFTDMARLG DQVDGQRPLA VIHAKDENSW QEAAKAVKAA
IKLADKAPES TPTVYRRISE
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