| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4930 |
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| Symbol | deoC |
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| ID | 6145690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 5045302 |
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| End bp | 5046081 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641619733 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_001746837 |
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| Protein GI | 170681011 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGATC TGAAAGCAAG CAGCCTGCGT GCACTGAAAT TGATGGACCT GACCACCCTG
AATGACGACG ACACCGATGA GAAAGTGATC GCCCTGTGTC ATCAGGCCAA AACTCCGGTC
GGCAATACCG CCGCTATCTG TATCTATCCT CGCTTTATCC CGATTGCTCG CAAAACTCTG
AAAGAGCAGG GCACCCCGGA AATCCGTATC GCTACGGTAA CTAACTTCCC ACACGGTAAC
GACGACATCG AAATCGCGCT GGCAGAAACC CGTGCGGCAA TCGCCTACGG TGCCGATGAA
GTTGACGTGG TGTTCCCGTA CCGCGCGCTG ATGGCGGGTA ACGAGCAGGT TGGTTTTGAC
CTGGTGAAAG CCTGTAAAGA GGCTTGCGCT GCGGCGAACG TCCTGCTGAA AGTGATTATT
GAAACCGGAG AACTGAAAGA CGAAGCGCTG ATCCGTAAAG CGTCTGAAAT CTCCATCAAA
GCGGGTGCTG ACTTCATCAA AACCTCTACC GGTAAAGTGG CTGTGAATGC GACGCCGGAA
AGCGCGCGCA TCATGATGGA AGTGATCCGC GATATGGGCG TAGAAAAAAC CGTTGGTTTC
AAACCGGCGG GCGGCGTGCG TACTGCGGAA GATGCGCAGA AATATCTCTC CATCGCCGAT
GAACTGTTCG GTGCTGACTG GGCTGATGCG CGTCACTACC GCTTTGGTGC TTCCAGCTTG
CTGGCAAGCC TGCTGAAAGC TCTGGGCCAC GGCGACGGTA AGAGCGCCAG CAGCTACTAA
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| Protein sequence | MTDLKASSLR ALKLMDLTTL NDDDTDEKVI ALCHQAKTPV GNTAAICIYP RFIPIARKTL
KEQGTPEIRI ATVTNFPHGN DDIEIALAET RAAIAYGADE VDVVFPYRAL MAGNEQVGFD
LVKACKEACA AANVLLKVII ETGELKDEAL IRKASEISIK AGADFIKTST GKVAVNATPE
SARIMMEVIR DMGVEKTVGF KPAGGVRTAE DAQKYLSIAD ELFGADWADA RHYRFGASSL
LASLLKALGH GDGKSASSY
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