Gene EcSMS35_4908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4908 
Symbol 
ID6145608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp5029957 
End bp5030424 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content50% 
IMG OID641619711 
Producthypothetical protein 
Protein accessionYP_001746818 
Protein GI170679763 
COG category[S] Function unknown 
COG ID[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000105331 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAAT TTCTGTTAGC GTTGGCGCAG GATATGATCC TCGCCGCCAT TCCAGCGGTC 
GGCTTTGCAA TGGTGTTCAA CGTTCCCGTG CGGGCGTTAC GCTGGTGTGC GCTGCTTGGC
TCGATAGGTC ATGGTTCCCG AATGATCTTA ATGACCAGCG GGTTGAATAT TGAGTGGTCA
ACTTTTATGG CTTCTATGCT GGTCGGCACC ATTGGTATTC AATGGTCGCG CTGGTATCTG
GCACATCCGA AAGTGTTTAC CGTGGCGGCT GTTATCCCTA TGTTCCCTGG CATATCAGCT
TATACCGCAA TGATTTCGGC GGTAAAAATC AGCCAGCTAG GTTACAGCGA ACCGTTGATG
ATTACCCTGT TAACCAACTT TCTTACAGCT TCATCGATTG TTGGTGCGTT ATCCATCGGT
CTTTCCATTC CTGGATTATG GTTGTACCGC AAGCGCCCTC GCGTATAA
 
Protein sequence
MIEFLLALAQ DMILAAIPAV GFAMVFNVPV RALRWCALLG SIGHGSRMIL MTSGLNIEWS 
TFMASMLVGT IGIQWSRWYL AHPKVFTVAA VIPMFPGISA YTAMISAVKI SQLGYSEPLM
ITLLTNFLTA SSIVGALSIG LSIPGLWLYR KRPRV