| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4892 |
|---|
| Symbol | |
|---|
| ID | 6142872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 5010454 |
|---|
| End bp | 5011410 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641619695 |
|---|
| Product | putative GTP-binding protein YjiA |
|---|
| Protein accession | YP_001746802 |
|---|
| Protein GI | 170680984 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGA TTGCAGTTAC CCTACTCACC GGTTTTTTAG GCGCGGGCAA AACCACCCTG
CTGCGCCATA TTCTTAATGA ACAGCACGGC TACAAAATTG CCGTGATTGA AAACGAATTC
GGCGAAGTCT CCGTTGATGA TCAACTGATT GGCGATCGCG CCACGCAGAT CAAAACGCTG
ACCAACGGCT GCATCTGTTG TTCGCGCTCC AACGAGCTGG AGGACGCGCT ACTCGACCTG
CTGGATAATC TCGACAAGGG CAATATTCAG TTCGACCGTC TGGTCATTGA ATGCACAGGC
ATGGCCGATC CCGGCCCGAT TATTCAGACC TTTTTCTCCC ATGAGATTTT ATGCCAGCGT
TACCTGCTGG ACGGCGTGAT TGCGCTGGTG GATGCGGTAC ATGCCGATGA GCAGATGAAC
CAGTTCACCA TCGCCCAGTC ACAGGTTGGC TACGCCGACC GTATTCTGCT GACTAAAACC
GACGTCGCAG GTGAAGCAGA AAAACTGCGC GAACGCCTGG CACGCATCAA CGCCCGCGCA
CCGGTCTACA CCGTCACCCA CGGCGACATC GACCTGGGCC TGTTGTTCAA CACCAACGGT
TTTATGCTGG AAGAAAACGT CGTCAGCACC AAACCGCGTT TCCACTTTAT CGCGGATAAA
CAAAACGATA TTTCGTCGAT TGTGGTGGAA CTGGATTACC CGGTAGATAT CAGCGAAGTT
TCCCGCGTGA TGGAAAACCT GCTGCTGGAA TCGGCGGATA AACTGCTGCG TTACAAAGGG
ATGCTGTGGA TTGACGGCGA ACCTAACCGC CTGCTGTTCC AGGGTGTCCA GCGCCTCTAC
AGCGCCGACT GGGACAGGCC ATGGGGCGAT GAAAAACCGC ATAGCACGAT GGTGTTTATC
GGGATTCAGC TGCCGGAGGA AGAGATTCGG GCGGCGTTTG CGGGGTTAAG GAAGTAA
|
|---|
| Protein sequence | MNPIAVTLLT GFLGAGKTTL LRHILNEQHG YKIAVIENEF GEVSVDDQLI GDRATQIKTL
TNGCICCSRS NELEDALLDL LDNLDKGNIQ FDRLVIECTG MADPGPIIQT FFSHEILCQR
YLLDGVIALV DAVHADEQMN QFTIAQSQVG YADRILLTKT DVAGEAEKLR ERLARINARA
PVYTVTHGDI DLGLLFNTNG FMLEENVVST KPRFHFIADK QNDISSIVVE LDYPVDISEV
SRVMENLLLE SADKLLRYKG MLWIDGEPNR LLFQGVQRLY SADWDRPWGD EKPHSTMVFI
GIQLPEEEIR AAFAGLRK
|
|---|
| |