Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4888 |
Symbol | |
ID | 6143246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 5005139 |
End bp | 5007232 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641619692 |
Product | hypothetical protein |
Protein accession | YP_001746799 |
Protein GI | 170679657 |
COG category | [S] Function unknown |
COG ID | [COG1479] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.886735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.908596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCTA CAGAAGCCCG CCTACTCGAT TTTTTAAAAC GTTCGCAGCA GTTTGTGATT CCCATTTATC AACGGACTTA TTCATGGACA GAACAACAAT GTCGGCAACT TTGGGACGAC ATCATTCGTG CCGGAAAGCG TGACGATATA TCAGCGCATT TTATCGGTTC GGTTGTTTAT ATTGAGCAGG GGTTGTATCA GGTTTCTGGT ATTTCTCCGT TACTGGTCAT TGATGGTCAA CAAAGGCTGA CGACCGCAAT GTTGCTGATT GAGGCTTTAT CGCGTCATCT TGGCGAAGAC GAAGTTTTTG ATGGCTTTTC AGCAATGAAA TTGCGTAATT ATTATTTACT CAATCCTTAT GAGTCCGGCG AGAAAGGATT TAAATTACTG CTGACCGAGA CTGATAAAGA CAGTTTGCTG GCGTTAATAA AACAAAGACC AATGCCAGAA AACTATTCCC ATCGAATAAT GGAAAACTTT ACTTTCTTTG ATGAGCAAAT TGCCAAACTC GGTGATGACT TGATCCCCTT ATGTCGTGGG TTAGCAAAAT TATTAATTGT CGATGTGGCG CTTAATCGTG GTCAGGATAA TCCGCAACTG ATTTTTGAAA GTATGAACTC TACCGGTAAG GCGTTAAGTC AGGCCGATCT GGTGCGCAAT TTTATTCTGA TGGGTCTCGA ACCAGAGCAT CAAACCCGGT TGTATGAAGA TCACTGGCGT CCAATGGAAG TCGCTTTTGG TCAGCAAGGT TACAGCGAAT ATTTTGACAG CTTTATGCGT CATTATCTGA CGGTAAAAAC GGGGGAGATC CCTCGTACAG ATGAAGTCTA TGAGGCATTT AAACTCCATG CCCGCAGCCA GAGTGTTGCT GAAAAAGGCG TGGATCACCT GGTTGAAGAT ATTCACATCT ACGCGGAGTA TTACTGTGCA ATGGCATTGG GTAAAGAAAG TGACAAATCG CTTGCTACGG CTTTTCAGGA TTTGCGCGAG TTAAAGGTCG ATGTGGCGTA TCCTTTCTTA CTGGCGCTTT ATCATGACTA TAAAAATGGC GATTTGCCTC ACGAAGATTT CCTGAGCATA ATTCGTTTAA TTGAATCTTA TGTTTTCCGC CGTGCAGTAT GTGCGATTCC GACAAATTCT CTTAACAAGA CGTTTGCTAC CTTTTATAAG GTCATTATTA AAGAAAAATA TCTGGAAAGT ATTCAGGTAC ATTTTCTGAA TCTGCCTTCA TATCGTCGTT TCCCCAACGA TGATGAATTT AAACGGGAAT TAAAAGTTCG CGATCTCTAT AACTTCCGCA GTCGCAGCTA CTGGTTACGA CGACTGGAAA ACGATAAACG CAGAGAGCGC GTGGAAGAGT TTACGATTGA GCATATTATG CCGCAGAACG AAAATTTGTC GGCTAAATGG CGTGAAGAGC TGGGAAGCGA CTGGCAGCGT GTGCATAAAG AACTGTTACA TACGTTGGGG AATCTCACAT TAACGCGCTA TAACTCCCGC TACAGTGACA GACCTTTCGC GGAAAAACGC GATATTGAAG ACGGCTTTAA GCATAGCCCG CTTTATTTGA ATATCGGTCT TGGACAGTGC GAAAAATGGG ATGAAGCCGC CATTCGCGCC CGTGCCGATC GTCTGGCCGA TCTCGCGGTT CAGGTCTGGC AAGCGCCTGC TCTTCCTGAA GAGGTTTTAG CTGTTTATCG GGCGCAGCCT GAAAACAAAA CCAGTTATAG CCTGAGTGAT TATCCTTTTC TTGCTGATGG TTCGCATAGC CGGGTGTTAT TTGATCATCT TCGCGATGAA GTTATGCGCC TGGACGCAGG GATCACGCAG GAAGTATTGA AGCTCTATAT TGCGTTTAAA GCGGAAACGA ATTTTGTTGA TGTTGTGCCG CAAAAAAGCC GACTGCGATT GTCGCTTAAT ATGCAGTTTC ATGAACTGGT CGATCCGAAA GGTATTGCCA AAGATGTGAC AAATGTTGGG CGCTGGGGCA ATGGTGATGT GGAAATTGGT TTCAGCGACC TCGCACAACT TCCTTACGTT ATGGGATTAA TTCGTCAGGC ATTTGAAAAA CAGATGGAGA GCGCGTTGGT CTAA
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Protein sequence | MKATEARLLD FLKRSQQFVI PIYQRTYSWT EQQCRQLWDD IIRAGKRDDI SAHFIGSVVY IEQGLYQVSG ISPLLVIDGQ QRLTTAMLLI EALSRHLGED EVFDGFSAMK LRNYYLLNPY ESGEKGFKLL LTETDKDSLL ALIKQRPMPE NYSHRIMENF TFFDEQIAKL GDDLIPLCRG LAKLLIVDVA LNRGQDNPQL IFESMNSTGK ALSQADLVRN FILMGLEPEH QTRLYEDHWR PMEVAFGQQG YSEYFDSFMR HYLTVKTGEI PRTDEVYEAF KLHARSQSVA EKGVDHLVED IHIYAEYYCA MALGKESDKS LATAFQDLRE LKVDVAYPFL LALYHDYKNG DLPHEDFLSI IRLIESYVFR RAVCAIPTNS LNKTFATFYK VIIKEKYLES IQVHFLNLPS YRRFPNDDEF KRELKVRDLY NFRSRSYWLR RLENDKRRER VEEFTIEHIM PQNENLSAKW REELGSDWQR VHKELLHTLG NLTLTRYNSR YSDRPFAEKR DIEDGFKHSP LYLNIGLGQC EKWDEAAIRA RADRLADLAV QVWQAPALPE EVLAVYRAQP ENKTSYSLSD YPFLADGSHS RVLFDHLRDE VMRLDAGITQ EVLKLYIAFK AETNFVDVVP QKSRLRLSLN MQFHELVDPK GIAKDVTNVG RWGNGDVEIG FSDLAQLPYV MGLIRQAFEK QMESALV
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