| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4879 |
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| Symbol | |
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| ID | 6147367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4994469 |
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| End bp | 4996442 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641619683 |
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| Product | pentapeptide repeat-containing protein |
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| Protein accession | YP_001746790 |
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| Protein GI | 170681566 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.511853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCAA CATTTAACAT ATACCAGGAT ATTCTCCCAG CATTCAACAT GTATTCGGGA
CTAAAACCTT GCCATGAAAA AAATAACCAA CCATTTGATA TTAACACGGA AATTGAAACC
ATACAAAAAC AAATTAATTA TGATATAAAT CATTTGAATG ACGGTTTGAT TAAGCGTGTA
CTGAATCTTT TTATTCACCT TATCTCTAAT CCCGATAATC TCGAATTAAC CTTAAATCGA
TATTCATCAA CAACAGAGCA AATCATCGGC AGAACCAAAA GAAATAGTTT ACATGAGTTT
GAAGTTGGCG ATCTAAAAAT AATATTTAAT CGACAAGATG ATAATGAAAG CGTATTAACT
ATTAAACACA AAGATATAAG TCATGGTTGC AATGTTAAAA CCGAGCAACT GCAGCAGTTT
ATTAAAATAA TGGAACAAAA AGCGCAACTA CCAATCTATA TTGACAAGAA CAATTTGAAA
GAGAGTATTT TCTCTGTTTT GCGAAATGAC CCACAGCACG TAGATAAAGA GCAATACCTT
CCCTGTGATA AGTTTTTAAC ACATGCCTGC AAAAATTCAA ATTCATTTGA AGTGAAATTA
GATGCCACTC ATCAATATCA ACATCTGAAT AACTTCATGA TTTCTTTTGA CCCAGTAGAA
AATCAATTAA CAATACGGGA TAACAATAAC GAGACTGAAA CTATCTCGTT GACAAACTTA
CAATGGGAAA ATGTGCTGCA ATACTACAGA GAAAACCACC AGCAGCCAAA TATAGCAGGA
TCACGAAATC TCACGGATAA TATAGATAAA ATTAAAAATA CAATATCCAC CTCTGAAATT
ATAGAGTGCG CCTCTCCTGA AATAAGAAGT AGCGTCCTGA ACGATCTTTA TAGCATTGCT
AATTTCCTCC CGGACAAAAA TCTGACACCA AATGAGAGCT GGAAAAGATT TTGCCATACA
TGCGAGCGCT TTTATGTTGC TCAGAAGAGT ATCACTGGAG ATAACAGTGA ACGTCTTACG
CGAAAAGTCT CTATCTCTGA TGCAGGAATT ACAATGACCT TCAAGATAGG TGATGTTGTC
ATCAATACTA TTAGCACTGC TATCCCTGAA GATGAATCGG GTCAACGGTG TATAGAAGGG
TTGAATTTAG CAGAGATGGA TTTAACCGGC ATAGACTTGT CGAAAATGGC GCTAAGGAAT
GTCAATTTTA ATGGCAGCAT TCTTAGAAAT GCGGATTTCT CCGGTACGAT CTGTGAAGGC
GTGGATTTTA CCGATTGTGA TCTCCGTTAT GCAACCTTTA TTGACGCCTC ATTAGAAAAA
ATCGATTTTC GTAAAGTTCG CCACTTGTTT AATATAAATT TTACAAATGC AAATCTACGG
AACAGCAACT TCAGCGGAAA AGTTCTCACT GGCGTTAATT TTACTGGAAG TGACCTTAGT
AACGCTTATC TTGAACACAT AGATTTCACA AAAGTGATTT TCTTTCCGTC ATTAATTATT
GGAGCAGTAT TTGATAATTC CAATCTATCA GAGAAAAATC TTTCAGACAA AGATCTTACT
AATATTAGCT GCATGTATAC CAATTTTACT AACGCTAATT TAACAAAATG CAAACTCTTA
AATACAAACT TTTCGGCTGC AAAATTTGAC AATACTAATT TCACTGGTAC AAAAGGTTCT
AATATTCTGT TTAACCATGC ATGGTTGTTC AATACGATAT TTATAGATAC GATTTTTAAA
AATGCCTGTT TTTTCAATGC CAAAGTGAAT AATGTTTCTC TTAAGAAAGC ATATATTTAC
AATGATAATA TCGATAAAAA AGCCAATGAC AGTACCGATA AACAAGCCAA GAACAGTACC
GAGCAACAGG ACAGTACCAG TTTTAATCAA GCCCGTTTAA AGAAAGAAGT GAATAGCAGT
TTTTCCATTC CGGGTTTAAC GTCTTATCAG CCAACGTATA TAGTTGACGA GTAG
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| Protein sequence | MDSTFNIYQD ILPAFNMYSG LKPCHEKNNQ PFDINTEIET IQKQINYDIN HLNDGLIKRV
LNLFIHLISN PDNLELTLNR YSSTTEQIIG RTKRNSLHEF EVGDLKIIFN RQDDNESVLT
IKHKDISHGC NVKTEQLQQF IKIMEQKAQL PIYIDKNNLK ESIFSVLRND PQHVDKEQYL
PCDKFLTHAC KNSNSFEVKL DATHQYQHLN NFMISFDPVE NQLTIRDNNN ETETISLTNL
QWENVLQYYR ENHQQPNIAG SRNLTDNIDK IKNTISTSEI IECASPEIRS SVLNDLYSIA
NFLPDKNLTP NESWKRFCHT CERFYVAQKS ITGDNSERLT RKVSISDAGI TMTFKIGDVV
INTISTAIPE DESGQRCIEG LNLAEMDLTG IDLSKMALRN VNFNGSILRN ADFSGTICEG
VDFTDCDLRY ATFIDASLEK IDFRKVRHLF NINFTNANLR NSNFSGKVLT GVNFTGSDLS
NAYLEHIDFT KVIFFPSLII GAVFDNSNLS EKNLSDKDLT NISCMYTNFT NANLTKCKLL
NTNFSAAKFD NTNFTGTKGS NILFNHAWLF NTIFIDTIFK NACFFNAKVN NVSLKKAYIY
NDNIDKKAND STDKQAKNST EQQDSTSFNQ ARLKKEVNSS FSIPGLTSYQ PTYIVDE
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