Gene EcSMS35_4872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4872 
Symbol 
ID6143141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4984579 
End bp4985040 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content54% 
IMG OID641619676 
Producthypothetical protein 
Protein accessionYP_001746783 
Protein GI170683169 
COG category[S] Function unknown 
COG ID[COG0700] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTC AGGTCCGCAA AAACGTCATG GATATGTTTA TCGATGGCGC GCGCCGTGGC 
TTTACTATCG CCACCACCAA CCTGCTGCCA AACGTGGTGA TGGCGTTTGT CATCATTCAG
GCGCTGAAAA TTACCGGCCT GCTCGACTGG GTGGGGCATA TCTGTGAACC GGTAATGGCG
CTGTGGGGAT TGCCAGGTGA AGCGGCAACC GTCCTTTTAG CCGCATTAAT GAGTATGGGC
GGCGCAGTCG GTGTTGCCGC CAGTCTGGCG ACCGCTGGCG CATTAACCGG CCACGATGTC
ACCGTTTTAC TGCCCGCGAT GTATTTAATG GGCAACCCGG TGCAAAATGT CGGTCGCTGC
CTGGGGACAG CCGAAGTGAA TGCCAAATAT TACCCGCATA TCATTACGGT CTGCGTGATT
AACGCATTGC TGTCGATCTG GGTTATGCAG CTTATTGTTT AA
 
Protein sequence
MTTQVRKNVM DMFIDGARRG FTIATTNLLP NVVMAFVIIQ ALKITGLLDW VGHICEPVMA 
LWGLPGEAAT VLLAALMSMG GAVGVAASLA TAGALTGHDV TVLLPAMYLM GNPVQNVGRC
LGTAEVNAKY YPHIITVCVI NALLSIWVMQ LIV