| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4870 |
|---|
| Symbol | |
|---|
| ID | 6144844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4982418 |
|---|
| End bp | 4983329 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641619674 |
|---|
| Product | putative DNA-binding transcriptional regulator |
|---|
| Protein accession | YP_001746781 |
|---|
| Protein GI | 170679932 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGCT GTGGTGCGGT TTTGCATAAT ATTGAAACAA AATGGCTTTA TGATTTTCTG
ACCCTGGAAA AATGCCGCAA CTTTTCCCAG GCGGCAGTCA GTCGCAACGT CTCGCAACCG
GCATTCAGCC GCCGCATCCG TGCACTGGAA CAGGCGATTG GCGTTGAATT GTTTAACCGC
CAGGTGACGC CGCTGCAACT CTCGGAACAA GGGAAAATCT TTCATTCGCA GATCCGCCAT
CTGTTGCAAC AGTTAGAAAG CAACCTGGCA GAGCTGCGTG GCGGCAGCGA TTACGCGCAA
CGTAAAATCA AGATAGCCGC TGCACACTCT CTTTCCCTCG GTCTGTTACC GTCCATTATC
AGCCAGATGC CGCCGCTCTT TACCTGGGCG ATTGAAGCCA TTGATGTCGA TGAAGCGGTC
GATAAACTGC GTGAAGGGCA AAGTGACTGT ATTTTTTCCT TTCACGACGA AGATTTGCTG
GAAGCACCAT TTGACCACAT TCGCTTATTT GAATCTCAAT TGTTCCCCGT CTGCGCCAGT
GACGAACACG GAGAAGCACT TTTTAACCTC GCGCAGCCAC ACTTTCCGTT ACTGAATTAC
AGCCGCAATT CCTACATGGG GCGATTGATT AATCGCACCC TGACGCGCCA CAGTGAGTTA
AGTTTCAGCA CCTTTTTTGT CTCTTCGATG AGCGAGCTTT TAAAGCAGGT TGCCCTCGAC
GGCTGTGGGA TTGCCTGGCT ACCGGAGTAC GCCATACAAC AAGAAATTCG CAGCGGGCAG
CTCGTTGTGC TTAATCGGGA CGAACTGGTG ATCCCGATTC AGGCTTACGC ATACAGGATG
AACACCCGTA TGAATCCCGT TGCCGAACGC TTCTGGCGTG AACTGCGCGA GCTGGAGATT
GTGCTTAGCT GA
|
|---|
| Protein sequence | MDGCGAVLHN IETKWLYDFL TLEKCRNFSQ AAVSRNVSQP AFSRRIRALE QAIGVELFNR
QVTPLQLSEQ GKIFHSQIRH LLQQLESNLA ELRGGSDYAQ RKIKIAAAHS LSLGLLPSII
SQMPPLFTWA IEAIDVDEAV DKLREGQSDC IFSFHDEDLL EAPFDHIRLF ESQLFPVCAS
DEHGEALFNL AQPHFPLLNY SRNSYMGRLI NRTLTRHSEL SFSTFFVSSM SELLKQVALD
GCGIAWLPEY AIQQEIRSGQ LVVLNRDELV IPIQAYAYRM NTRMNPVAER FWRELRELEI
VLS
|
|---|
| |