| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4858 |
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| Symbol | ptnC |
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| ID | 6143529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4965184 |
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| End bp | 4966248 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641619662 |
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| Product | dihydroxyacetone kinase subunit DhaK |
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| Protein accession | YP_001746769 |
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| Protein GI | 170683691 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2376] Dihydroxyacetone kinase |
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| TIGRFAM ID | [TIGR02363] dihydroxyacetone kinase, DhaK subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT TAATTAACCA GATTGATTCT GTTGTCACAG AACAAATGGA AGGACTCATC
GCCACCTGGC CACACCTGCA GGCAAATTAC GCGCCCCGAT ATGTGTGGTG CAAACAAACC
GATAATGCAG TGGCGCTGAT TTCAGGCGGC GGCTCAGGCC ATGAACCACT GCATGCAGGT
TTTGTCGGTA TGGGAATGTT AACCGGTGCA TGTCCTGGTG AAATCTTCAC ATCGCCCACG
CCAGATCAAA TGATCGAATG TGCCAAAGCG GTTGATAATG GTTCTGGCGT TCTGTTTTTC
ATCAAAAATT ACACAGGCGA TATTCTGAAT TTCGAAACGG CAGTCGAGAT GTTACACGAA
GAAGGCATCG CCGTTGGGAC CGTCATTATT GATGATGATG TAGCGGTAAA AGATAGCCTG
TATACAGCCG GACGTCGCGG TGTTGCGGGT ACAGTTTTTG TTGAAAAGAT TGTCGGTGCG
GCTGCACTTC AGGGATATAA CCTGGGGCAG TGCGAGCAAC TTGGCAAAGA TGTTAACAAT
GCCACCCGTT CTTTTGGCAT CGCACTGTCA GCCTGTACGG TTCCCGCCGC GGGAAAACCC
TCATTTGAAC TGGCTGATAA TGAAATCGAA TTTGGTGTCG GGATCCACGG TGAACCCGGC
ATTGAACGCC GCACTTTGCA AGATCTGAAC ACTTTAATCG ACAGCGTGAT AGCGCAATTA
CTGGATAATA CCCCCTGGCG ACGCACATTA CGCCATTGGG ATCGCCATGC GGGGGGATGG
ATTGACGCAT CATCAATGAA TGAGTCATTC GATCAAAATG CCGAATATAT TGTGTTAATT
AACGGACTTG GCAGCACGCC TGAATCAGAG TTATATGGTG TGGCCAGGGT ATTTATGTGC
GCCGCACAGC GCCAGGGAAT TAAAATTAGC CGCCAGTTGG TCGGTAATTA TTGTACATCA
TTAGATATGG CCGGATTTTC CATCAGCCTG CTGAAATGTA CCCCAGAGTT TTTGCAACTT
TGGGATGCCC CGGTCAATAC GCCAGCGCTT CGTTGGGGAT GTTAA
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| Protein sequence | MKKLINQIDS VVTEQMEGLI ATWPHLQANY APRYVWCKQT DNAVALISGG GSGHEPLHAG
FVGMGMLTGA CPGEIFTSPT PDQMIECAKA VDNGSGVLFF IKNYTGDILN FETAVEMLHE
EGIAVGTVII DDDVAVKDSL YTAGRRGVAG TVFVEKIVGA AALQGYNLGQ CEQLGKDVNN
ATRSFGIALS ACTVPAAGKP SFELADNEIE FGVGIHGEPG IERRTLQDLN TLIDSVIAQL
LDNTPWRRTL RHWDRHAGGW IDASSMNESF DQNAEYIVLI NGLGSTPESE LYGVARVFMC
AAQRQGIKIS RQLVGNYCTS LDMAGFSISL LKCTPEFLQL WDAPVNTPAL RWGC
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