| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4857 |
|---|
| Symbol | ptnK |
|---|
| ID | 6144485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4964539 |
|---|
| End bp | 4965171 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641619661 |
|---|
| Product | dihydroxyacetone kinase subunit DhaL |
|---|
| Protein accession | YP_001746768 |
|---|
| Protein GI | 170684228 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2376] Dihydroxyacetone kinase |
|---|
| TIGRFAM ID | [TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC AAAACAAACA TGTTATTGCC TGGCTGGAGA GTTGTGCTGC ACATCTCACT
GAACAACAAG ATTTTCTAAC CGCACTTGAC AGAGATATTG GTGATGCCGA CCACGGCCTC
AATATGAATC GTGGTTTCAG TGCAGTGAAA GCGACGTTGC CCGACATTGA ACGTCAGCAT
ATTGGCAATA TTCTTAAAAA TACTGGCATG AAACTACTTT CCAGCGTTGG CGGTGCCAGT
GGTCCTCTTT ACGGCACATT ATTTATTCGC GCTTCTGCGG CAGTGGGAGC CAGAACAGAA
TTAACTCTGG AAGAGTGGCT GGCGTGTCTG GAAGAAGGGA TTGCAGGCGT TATCGCACGA
GGAAAAGCAG AACAAGGGGA TAAAACACTG TGTGATGTCT GGGTTCCAGT TCTCCACGAA
GCCAAAAAGA ACCTGCAAGC CGGAATGTCG CCTTCCCTTC TGCTGAATAC GATGGTGCAA
GATGCGGCAA CAGCAGTCGA TAACACCATC AATATGCAGG CGAAAAAAGG ACGTGCCAGT
TATCTCGGCG CTCGCAGTGT GGGCCATCAG GATCCAGGCG CGACCTCCTC CTGGCTGATG
ATTAAGGCTA TGCAGGAAGG ATTCGCGGGA TAA
|
|---|
| Protein sequence | MKIQNKHVIA WLESCAAHLT EQQDFLTALD RDIGDADHGL NMNRGFSAVK ATLPDIERQH
IGNILKNTGM KLLSSVGGAS GPLYGTLFIR ASAAVGARTE LTLEEWLACL EEGIAGVIAR
GKAEQGDKTL CDVWVPVLHE AKKNLQAGMS PSLLLNTMVQ DAATAVDNTI NMQAKKGRAS
YLGARSVGHQ DPGATSSWLM IKAMQEGFAG
|
|---|
| |