| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4845 |
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| Symbol | fimF |
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| ID | 6143878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4952365 |
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| End bp | 4952895 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641619649 |
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| Product | fimbrial protein FimF |
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| Protein accession | YP_001746756 |
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| Protein GI | 170681901 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAACA AACCTTTTTA TCTTCTTTGC GCTTTTTTGT GGCTGGCGGT AAGTCACGCT
TTGGCTGCGG ATAGCACGAT TACTATCCGC GGCTATGTCA GAGATAATGG CTGTAGTGTG
GCCGCTGAAT CAACCAATTT TACTGTTGAT CTGATGGAAA ACGCGGCGAA GCAATTTAAC
AACATTGGCG CGACGACTCC TGTCGTTCCA TTTCGTATTT TGCTGTCACC CTGTGGTAAC
GCTGTTTCTG CCGTAAAGGT TGGGTTTACC GGCGTTGCAG ATAGCCACAA TGCCAACCTG
CTTGCACTTG AAAATACGGT GTCAGCGGCT GCGGGACTGG GAATACAGCT TCTGAATGAG
CAGCAAAATG AGATACCCCT TAATGCCCCA TCGTCCGCGA TTTCGTGGAC GACCCTGACG
CCGGGTAAAC CAAATACGTT GAATTTTTAC GCCCGGCTAA TGGCGACACA GGTGCCTGTC
ACTGCGGGGC ATATTAATGC CACGGCTACC TTCACTCTTG AATATCAGTA A
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| Protein sequence | MRNKPFYLLC AFLWLAVSHA LAADSTITIR GYVRDNGCSV AAESTNFTVD LMENAAKQFN
NIGATTPVVP FRILLSPCGN AVSAVKVGFT GVADSHNANL LALENTVSAA AGLGIQLLNE
QQNEIPLNAP SSAISWTTLT PGKPNTLNFY ARLMATQVPV TAGHINATAT FTLEYQ
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