| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4843 |
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| Symbol | fimC |
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| ID | 6143435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4949002 |
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| End bp | 4949652 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641619647 |
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| Product | chaperone protein FimC |
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| Protein accession | YP_001746754 |
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| Protein GI | 170683403 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATGG TGGTTGCCGG ACGCGCTGAA GCGGGAGTGG CCTTAGGTGC GACTCGCGTA
ATTTATCCGG CAGGGCAAAA ACAAGTGCAA CTTGCCGTGA CAAATAATGA TGAAAATAGT
ACCTATTTAA TTCAATCATG GGTGGAAAAT GCCGATGGTG TTAAGGATGG TCGTTTTATC
GTGACGCCAC CTCTGTTTGC GATGAAGGGA AAAAAAGAGA ATACCTTACG TATTCTTGAT
GCAACAAATA ACCAATTGCC ACAGGATCGG GAAAGTTTAT TCTGGATGAA CGTTAAAGCG
ATTCCGTCAA TGGATAAATC AAAATTGACT GAGAATACGC TACAGCTCGC AATTATCAGC
CGCATTAAAC TGTACTATCG CCCGGCTAAA TTAGCGTTGC CACCCGATCA GGCCGCAGAA
AAATTAAGAT TTCGTCGTAG CGCGAATTCT CTGACGCTGA TTAACCCGAC ACCCTATTAC
CTGACGGTAA CAGAGTTGAA TGCCGGAACC CGGGTTCTTG AAAATGCATT GGTGCCTCCA
ATGGGCGAAA GCACGGTTAA ATTGCCTTCT GATGCAGGAA GCAATATTAC TTACCGAACA
ATAAATGATT ATGGCGCACT TACCCCCAAA ATGACGGGCG TAATGGAATA A
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| Protein sequence | MAMVVAGRAE AGVALGATRV IYPAGQKQVQ LAVTNNDENS TYLIQSWVEN ADGVKDGRFI
VTPPLFAMKG KKENTLRILD ATNNQLPQDR ESLFWMNVKA IPSMDKSKLT ENTLQLAIIS
RIKLYYRPAK LALPPDQAAE KLRFRRSANS LTLINPTPYY LTVTELNAGT RVLENALVPP
MGESTVKLPS DAGSNITYRT INDYGALTPK MTGVME
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