Gene EcSMS35_4839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4839 
SymbolfimE 
ID6145487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4946661 
End bp4947257 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content47% 
IMG OID641619643 
Producttyrosine recombinase 
Protein accessionYP_001746750 
Protein GI170682577 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAAAC GTCGTTATCT TACCGGTAAA GAAGTTCAGG CCATGATGCA GGCGGTTTGT 
TACGGGGCAA CGGGAGCCAG AGATTATTGT CTTATTCTGT TGGCATATCG GCATGGGATG
CGTATTAGTG AACTGCTTGA TCTGCATTAT CAGGACCTTG ACCTTAATGA AGGTCGAATA
AATATTCGCC GACTGAAGAA CGGATTTTCT ACCGTTCACC CGTTACGTTT TGATGAGCGT
GAAGCCGTGG AACGCTGGAC CCAGGAACGT GCTAACTGGA AAGGCGCTGA CCGGACCGAC
GCTATATTTA TTTCTCGCCG CGGGAGTCGG CTTTCTCGCC AGCAGGCCTA TCGCATTATT
CGCGATGCCG GTATTGAAGC TGGAACCGTA ACGCAGACTC ATCCTCATAT GTTAAGGCAT
GCTTGCGGTT ATGAACTGGC AGAGCGTGGT GCAGATACCC GTTTAATTCA GGATTATCTC
GGGCATCGAA ATATTCGCCA TACTGTGCGT TATACCGCCA GTAATGCTGC TCGTTTTGCC
GGATTATGGG AAAGAAATAA TCTCATAAAC GAAAAATTAA AAAGAGAAGA GGTTTGA
 
Protein sequence
MSKRRYLTGK EVQAMMQAVC YGATGARDYC LILLAYRHGM RISELLDLHY QDLDLNEGRI 
NIRRLKNGFS TVHPLRFDER EAVERWTQER ANWKGADRTD AIFISRRGSR LSRQQAYRII
RDAGIEAGTV TQTHPHMLRH ACGYELAERG ADTRLIQDYL GHRNIRHTVR YTASNAARFA
GLWERNNLIN EKLKREEV