Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4839 |
Symbol | fimE |
ID | 6145487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4946661 |
End bp | 4947257 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641619643 |
Product | tyrosine recombinase |
Protein accession | YP_001746750 |
Protein GI | 170682577 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTAAAC GTCGTTATCT TACCGGTAAA GAAGTTCAGG CCATGATGCA GGCGGTTTGT TACGGGGCAA CGGGAGCCAG AGATTATTGT CTTATTCTGT TGGCATATCG GCATGGGATG CGTATTAGTG AACTGCTTGA TCTGCATTAT CAGGACCTTG ACCTTAATGA AGGTCGAATA AATATTCGCC GACTGAAGAA CGGATTTTCT ACCGTTCACC CGTTACGTTT TGATGAGCGT GAAGCCGTGG AACGCTGGAC CCAGGAACGT GCTAACTGGA AAGGCGCTGA CCGGACCGAC GCTATATTTA TTTCTCGCCG CGGGAGTCGG CTTTCTCGCC AGCAGGCCTA TCGCATTATT CGCGATGCCG GTATTGAAGC TGGAACCGTA ACGCAGACTC ATCCTCATAT GTTAAGGCAT GCTTGCGGTT ATGAACTGGC AGAGCGTGGT GCAGATACCC GTTTAATTCA GGATTATCTC GGGCATCGAA ATATTCGCCA TACTGTGCGT TATACCGCCA GTAATGCTGC TCGTTTTGCC GGATTATGGG AAAGAAATAA TCTCATAAAC GAAAAATTAA AAAGAGAAGA GGTTTGA
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Protein sequence | MSKRRYLTGK EVQAMMQAVC YGATGARDYC LILLAYRHGM RISELLDLHY QDLDLNEGRI NIRRLKNGFS TVHPLRFDER EAVERWTQER ANWKGADRTD AIFISRRGSR LSRQQAYRII RDAGIEAGTV TQTHPHMLRH ACGYELAERG ADTRLIQDYL GHRNIRHTVR YTASNAARFA GLWERNNLIN EKLKREEV
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