Gene EcSMS35_4823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4823 
Symbol 
ID6145548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4910391 
End bp4911098 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content38% 
IMG OID641619627 
Producthypothetical protein 
Protein accessionYP_001746734 
Protein GI170680753 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGA TTATAGGGAA ACAATTACCT AAAAAAGATC AAGATAATGA ACACTGGGTA 
TCCATGTCAG ACCTAATGGC AGGGCTGATG ATGGTTTTTA TGTTCATATC TATTGCTTAT
ATGCACTACG TACGTATTGA AAAAGAAAAA ATTAAAGAAG TTGCCGTAGC CTACGAGAAT
GCTCAGTTAC AGCTTTATAA TGCTCTGGAT ATTGAGTTTG CAAAGGATTT GCAAGACTGG
GATGCAGAGA TCGATAAGCA GACTCTGGAG GTTCGATTTA AATCACCGGA TGTTTTATTT
GGCTTAGGAA GCACAGAGCT TAAACCAAAG TTTAAACTCA TTCTTGACGA CTTCTTTCCT
CGCTACCTAA AAGTTCTTGA TAATTATCAA GAACATATTA CTGAAGTCCG CATTGAAGGT
CACACAAGTA CTGACTGGAC TGGAACAACG AATCCTGATA TTGCTTATTT TAATAATATG
GCACTATCAC AAGGTCGTAC ACGTGCAGTA TTACAATACG TTTATGATAT AAAAAATATC
GCGACACACC AACAATGGGT TAAAAGTAAA TTTGCCGCAG TAGGTTATTC ATCTGCACAT
CCCATTCTTG ATAAAACCGG CAAGGAGGAT CCTAATCGCT CTCGTCGTGT CACCTTCAAA
GTTGTAACAA ATGCCGAGTT GCAGATTAGA AAGATTATTC AGGAGTAA
 
Protein sequence
MDKIIGKQLP KKDQDNEHWV SMSDLMAGLM MVFMFISIAY MHYVRIEKEK IKEVAVAYEN 
AQLQLYNALD IEFAKDLQDW DAEIDKQTLE VRFKSPDVLF GLGSTELKPK FKLILDDFFP
RYLKVLDNYQ EHITEVRIEG HTSTDWTGTT NPDIAYFNNM ALSQGRTRAV LQYVYDIKNI
ATHQQWVKSK FAAVGYSSAH PILDKTGKED PNRSRRVTFK VVTNAELQIR KIIQE