Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4823 |
Symbol | |
ID | 6145548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4910391 |
End bp | 4911098 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641619627 |
Product | hypothetical protein |
Protein accession | YP_001746734 |
Protein GI | 170680753 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGA TTATAGGGAA ACAATTACCT AAAAAAGATC AAGATAATGA ACACTGGGTA TCCATGTCAG ACCTAATGGC AGGGCTGATG ATGGTTTTTA TGTTCATATC TATTGCTTAT ATGCACTACG TACGTATTGA AAAAGAAAAA ATTAAAGAAG TTGCCGTAGC CTACGAGAAT GCTCAGTTAC AGCTTTATAA TGCTCTGGAT ATTGAGTTTG CAAAGGATTT GCAAGACTGG GATGCAGAGA TCGATAAGCA GACTCTGGAG GTTCGATTTA AATCACCGGA TGTTTTATTT GGCTTAGGAA GCACAGAGCT TAAACCAAAG TTTAAACTCA TTCTTGACGA CTTCTTTCCT CGCTACCTAA AAGTTCTTGA TAATTATCAA GAACATATTA CTGAAGTCCG CATTGAAGGT CACACAAGTA CTGACTGGAC TGGAACAACG AATCCTGATA TTGCTTATTT TAATAATATG GCACTATCAC AAGGTCGTAC ACGTGCAGTA TTACAATACG TTTATGATAT AAAAAATATC GCGACACACC AACAATGGGT TAAAAGTAAA TTTGCCGCAG TAGGTTATTC ATCTGCACAT CCCATTCTTG ATAAAACCGG CAAGGAGGAT CCTAATCGCT CTCGTCGTGT CACCTTCAAA GTTGTAACAA ATGCCGAGTT GCAGATTAGA AAGATTATTC AGGAGTAA
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Protein sequence | MDKIIGKQLP KKDQDNEHWV SMSDLMAGLM MVFMFISIAY MHYVRIEKEK IKEVAVAYEN AQLQLYNALD IEFAKDLQDW DAEIDKQTLE VRFKSPDVLF GLGSTELKPK FKLILDDFFP RYLKVLDNYQ EHITEVRIEG HTSTDWTGTT NPDIAYFNNM ALSQGRTRAV LQYVYDIKNI ATHQQWVKSK FAAVGYSSAH PILDKTGKED PNRSRRVTFK VVTNAELQIR KIIQE
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