Gene EcSMS35_4818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4818 
Symbol 
ID6147316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4906807 
End bp4907679 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content49% 
IMG OID641619623 
Producthypothetical protein 
Protein accessionYP_001746730 
Protein GI170683509 
COG category[V] Defense mechanisms 
COG ID[COG3440] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA GTAAATCGCT ACAGCAGGCA ATCGCCAATA TAAAAATCTG GCACAAGGGT 
GAACAGCGCG CGCCGCATAA ACCATTGTTA CTGCTATACG TATTAGCGGG ATACCTGAAT
GGGCATCCGC GCCTTTTCGA TTATGGATTG GAAATCTACG AACCTCTGCA CAATTTACTG
GAACGTTTTG GGCCACAGCG TTCACAGTAC CGACCTGATA TGCCGTTCTG GCGATTACAA
GGCGACGGAT TCTGGCAATT ACACAATGCC GAGCTTTGCT CAACAGCAGG GAGCAGCCGA
CAACCGCCAG TGAAGGAACT GAACGAATAC CACGTTGCAG GCGGTTTCGA TGAACAGCAC
TACGCCCTGG TAACCGGCAA TAAAAAACTC ATCAATACTC TGGCGCAACA GATACTCGAA
GCGCACTTCA CCGAGAGTAT TCAGGAAGAA ATTGCTGACG AGCTGGGTTT TGATCTCCAG
CAAATCCGTA AACAGCGTGA CCCGTTATTT CGCAAAAATG TATTACGCGC TTATAACTAC
CAGTGCGCGA TATGTGGCTT TAATATGCGC CACGACGACA CCACCGTCGC GCTGGAAGCG
GCGCATATAA AATGGAAACA GCACGGCGGT CCTTGTGAAA TTCCTAATGG CCTGGCGCTT
TGCGCAATTC ACCATAAAGC CTTTGATAAA GGATCGATTG GCCTGGATGA AAATATGCGG
GTACTGGTCT CGGATGCGGT AAACGGCGGA GGGATCGTTG AGAGATTATT CTGGGATTTT
GATGGGAAAA CTATTGCGTT GCCACAGGTG CGTAAAAATT ACCCTTTTGA GGGGTTTGTG
GAGTGGCATC GAAAAGAGGT TTTTAGGGGG TGA
 
Protein sequence
MASSKSLQQA IANIKIWHKG EQRAPHKPLL LLYVLAGYLN GHPRLFDYGL EIYEPLHNLL 
ERFGPQRSQY RPDMPFWRLQ GDGFWQLHNA ELCSTAGSSR QPPVKELNEY HVAGGFDEQH
YALVTGNKKL INTLAQQILE AHFTESIQEE IADELGFDLQ QIRKQRDPLF RKNVLRAYNY
QCAICGFNMR HDDTTVALEA AHIKWKQHGG PCEIPNGLAL CAIHHKAFDK GSIGLDENMR
VLVSDAVNGG GIVERLFWDF DGKTIALPQV RKNYPFEGFV EWHRKEVFRG