Gene EcSMS35_4791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4791 
Symbol 
ID6144051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4882937 
End bp4883827 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID641619598 
ProductIS1203 transposase orfB 
Protein accessionYP_001746705 
Protein GI170679822 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.2388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCAC TGCTGGATAA GCTGCGTGAG CAGTACGGGG TCGGACCGCT ATGCAGCGAA 
CTGCATATTG CCCCGTCAAC GTATTACCAC TGTCAGCAAC AGCGACATCA TCCGGATAAA
CGCAGTGCCC GTGCGCAGCG CGATGACTGG CTGAAGAAAG AGATACAGCG CGTATACGAT
GAAAATCATC AGGTGTACGG TGTGCGTAAA GTCTGGCGTC AGTTGTTACG GGAAGGTATC
AGAGTGGCCA GATGCACTGT GGCACGTCTC ATGGCGGTTA TGGGACTTGC CGGTGTTCTC
CGGGGTAAAA AGGTCCGTAC GACCATCAGC CGGAAAGCCG TTGCCGCAGG CGACCGCGTA
AACCGTCAGT TCGTGGCAGA ACGACCTGAC CAGCTGTGGG TGGCTGATTT TACTTACGTC
AGCACATGGC GGGGCTTCGT CTATGTGGCG TTCATCATTG ATGTGTTTGC CGGATACATC
GTGGGGTGGC GGGTCTCATC GTCTATGGAA ACGACATTCG TGCTGGATGC TCTGGAGCAG
GCGTTATGGG CCCGTCAACC GTCCGGCACA GTCCATCACA GTGATAAAGG TTCTCAGTAT
GTATCGCTGG CCTACACACA GCGGCTTAAG GAAGCCGGAT TACTGGCATC AACAGGAAGT
ACTGGTGACT CGTATGACAA CGCGATGGCG GAGAGCATCA ATGGCCTTTA CAAAGCGGAG
GTAATACACC GTAAGAGCTG GAAAAACCGG ACAGAAGTGG AGCTGGCCAC ACTCACGTGG
GTGGACTGGT ATAACAATCG ACGATTGCTG GAAAGGCTGG GCCATATCCC ACCGGCAGAA
GCAGAAAAAG CTTATTATGC TTCCATCGGA AACGATGATC TGGCAGCCTG A
 
Protein sequence
MMPLLDKLRE QYGVGPLCSE LHIAPSTYYH CQQQRHHPDK RSARAQRDDW LKKEIQRVYD 
ENHQVYGVRK VWRQLLREGI RVARCTVARL MAVMGLAGVL RGKKVRTTIS RKAVAAGDRV
NRQFVAERPD QLWVADFTYV STWRGFVYVA FIIDVFAGYI VGWRVSSSME TTFVLDALEQ
ALWARQPSGT VHHSDKGSQY VSLAYTQRLK EAGLLASTGS TGDSYDNAMA ESINGLYKAE
VIHRKSWKNR TEVELATLTW VDWYNNRRLL ERLGHIPPAE AEKAYYASIG NDDLAA