Gene EcSMS35_4790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4790 
Symbol 
ID6142760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4882614 
End bp4882940 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content54% 
IMG OID641619597 
ProductIS1203 transposase orfA 
Protein accessionYP_001746704 
Protein GI170679889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.336245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA ATACTCGTTT TTCCCCCGAA GTCCGTCAGA GGGCGATTCG TATGGTTCTG 
GAAAGTCAGG GCGAATATGA CTCACAGTGG GCGGCAATTT GTTCCATTGC CCCAAAGATT
GGCTGTACAC CGGAGACTCT GCGTGTCTGG GTACGCCAGC ATGAGCGGGA TACCGGAGGC
GGTGATGGCG GGCTCACCAC CGCTGAACGT CAGCGTCTGA AAGAGCTGGA ACGTGAAAAT
CGTGAACTGC GCCGCAGTAA CGATATCCTT CGCCAGGCTT CCGCTTATTT TGCGAAGGCG
GAGTTCGACC GCCTCTGGAA AAAATGA
 
Protein sequence
MTKNTRFSPE VRQRAIRMVL ESQGEYDSQW AAICSIAPKI GCTPETLRVW VRQHERDTGG 
GDGGLTTAER QRLKELEREN RELRRSNDIL RQASAYFAKA EFDRLWKK