Gene EcSMS35_4789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4789 
Symbol 
ID6143468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4881859 
End bp4882557 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content49% 
IMG OID641619596 
Producthypothetical protein 
Protein accessionYP_001746703 
Protein GI170683471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.292295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGAAAC AGGTTGATCG TGAGACCGCT CTGCGGGTTC TTGGTGCGCT CTGGCAGTAT 
AAAACGGAAT CCATGCCTGA ACAGGCTGAA CAAAGCCGTA ATGACTATCT TGCACTGATT
TCCCGCTTAG AAAACGCTGA CACCGATGAA GCCAAAGGCG TTAAGCCTGT CCAGGCATGG
CATGGTGTTG ACTGGCATTC ACTTATCGCT GAAATGAACG AGATGAAATC TCTGCCGCCA
CATCCACGTG GTTTTCGGTT TGAAGCCTGG CTTGCTGAAC TGTTCAGTAT CTTTAAGCTT
GCTCCCCGTT CGTCTTTCCG AAATACAGGC GAACAGATTG ACGGAAGTTT CCGACTGAAT
GATGAATTTT ACCTGATGGA GGCAAAGTGG CATCAGAAAA GAACGTCGGC TGCCGACCTC
CATGTATTTG AAGGAAAGCT CAGTACCAAG GCAACCTGGA CACGCGGTGT TTTTATCAGT
TGGATGGGCT TTACGCCTGA AGGCCTGACG GCTTTTGGTA AAGGGAAGCG GGTTATCTGT
GTCAGTGGTT ATGATCTTTA CCACTCACTG AATCATAGGA TCCCTTTACC CGACCTTCTG
GATGCTAAAA CCCGGCACGC GGCTGAAACG GGAGAGCCCT ATGCTGAGTT CGACCGACTA
TATGCACTGA AAGACAAACA GTTCGGCACG CTGAAATAA
 
Protein sequence
MLKQVDRETA LRVLGALWQY KTESMPEQAE QSRNDYLALI SRLENADTDE AKGVKPVQAW 
HGVDWHSLIA EMNEMKSLPP HPRGFRFEAW LAELFSIFKL APRSSFRNTG EQIDGSFRLN
DEFYLMEAKW HQKRTSAADL HVFEGKLSTK ATWTRGVFIS WMGFTPEGLT AFGKGKRVIC
VSGYDLYHSL NHRIPLPDLL DAKTRHAAET GEPYAEFDRL YALKDKQFGT LK