| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4786 |
|---|
| Symbol | |
|---|
| ID | 6147488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4879662 |
|---|
| End bp | 4880102 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641619595 |
|---|
| Product | H-NS histone family protein |
|---|
| Protein accession | YP_001746702 |
|---|
| Protein GI | 170681700 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2916] DNA-binding protein H-NS |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.428354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA AGAAGTTTTC TGTTGAGAAT GAAGATCTCT CTACTGTTCG TACATCACTT
CTTAATTCCA ACCTTGTCCG GAAGTTGATC ATGGAAATGT CTGATGAAGA CTTCAATCAA
GTTAAGGATA ACCTTGAAAA GGCCATTGAG CAGCGTAATG AGTTGAAGGA TTCTTTGGCA
ATTATCAAAA AGTACATGGA TGACGCAGGT GTAACGGCGG AAGATGTGTA TCGTGAATTT
GGCAAAAAAT TACAGACGGG CAGAAAAAAC GATTCAGGAG AGTCTAATAA GTACAGGTAT
GAGTATAACG GTCAAATAAT GTACTGGAGT GGACAAGGTC GTCGGCCTTC TGTTATTGCA
GAAGCAATAA AAGCCGGAGG TTCTCTTGAT GATTTTCTTA TATCTCAGGG CACATCATCA
TCTTGTTCTG ATTATGAGTG A
|
|---|
| Protein sequence | MSKKKFSVEN EDLSTVRTSL LNSNLVRKLI MEMSDEDFNQ VKDNLEKAIE QRNELKDSLA
IIKKYMDDAG VTAEDVYREF GKKLQTGRKN DSGESNKYRY EYNGQIMYWS GQGRRPSVIA
EAIKAGGSLD DFLISQGTSS SCSDYE
|
|---|
| |