Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4782 |
Symbol | |
ID | 6147216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4876033 |
End bp | 4876266 |
Gene Length | 234 bp |
Protein Length | 77 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641619592 |
Product | AlpA family transcriptional regulator |
Protein accession | YP_001746699 |
Protein GI | 170680125 |
COG category | [K] Transcription |
COG ID | [COG3311] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.320716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGACCA CAACAAGCCA CGACAGCGTG TTACTGCGTG CCGACGATCC CCTGATCGAC ATGAACTACA TCACCAGTTT CACCGGCATG ACCGATAAAT GGTTTTACAA GTTGATCAGT GAAGGCCATT TCCCGAAACC CATCAAGCTG GGCCGCAGCA GCCGCTGGTA CAAAAGTGAA GTGGAGCAGT GGATGCAGCA GCGAATCGAG GAGTCACGAG GAGCAGCAGC ATGA
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Protein sequence | MLTTTSHDSV LLRADDPLID MNYITSFTGM TDKWFYKLIS EGHFPKPIKL GRSSRWYKSE VEQWMQQRIE ESRGAAA
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