Gene EcSMS35_4771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4771 
Symbol 
ID6143978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4869886 
End bp4870776 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID641619583 
ProductIS1203 transposase orfB 
Protein accessionYP_001746690 
Protein GI170680174 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.220432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCAC TGCTGGATAA GCTGCGTGAG CAGTACGGGG TCGGACCGGT ATGCAGCGAA 
CTGCATATTG CCCCGTCAAC GTATTACCAT TGTCAGCAAC AGCGACATCA TCCGGATAAA
CGCAGTGCCC GTGCGCAGCA CGACGACTGG CTGAAGAGAG AGATACAGCG CGTATACGAT
GAAAATCATC AGGTGTACGG TGTGCGTAAA GTCTGGCGTC AGTTGTTACG GGAAGGAATC
AGGGTGGCCA GATGTACAGT GGCACGTCTC ATGGCGGTTA TGGGACTTGC CGGTGTTCTC
CGGGGTAAAA AGGTCCGTAC GACCATCAGC CGGAAAGCCG TTGCCGCAGG CGACCGCGTA
AACCGTCAGT TCGTGGCAGA ACGACCTGAC CAGCTGTGGG TGGCTGATTT TACTTACGTC
AGCACATGGC AGGGCTTCGT CTATGTGGCG TTTATCATTG ATGTGTTTGC CGGATACATC
GTGGGGTGGC GGGTCTCATC GTCTATGGAA ACGACATTCG TGCTGGATGC GCTGGAGCAG
GCGTTGTGGG CCCGTCGTCC GTCTGGCACC ATCCATCACA GCGATAAAGG CTCTCAGTAT
GTGTCACTGG CCTATACGGA GCGACTAAAA GAAGCCGGAT TACTGGCATC AACAGGGAGT
ACAGGCGACT CGTATGACAA CGCGATGGCT GAGAGCATCA ATGGTCTTTA CAAAGCGGAG
GTAATACACC GTAAGAGCTG GAAAAACCGT GCAGAAGTGG AACTGGCCAC ACTAACGTGG
GTGGACTGGT ATAACAATCG ACGATTGCTG GGAAGGCTGG GCCATACTCC TCCGGCAGAA
GCAGAAAAAG CTTATTATGC TTCCATCGGA AACGATGATC TGGCAGCCTG A
 
Protein sequence
MMPLLDKLRE QYGVGPVCSE LHIAPSTYYH CQQQRHHPDK RSARAQHDDW LKREIQRVYD 
ENHQVYGVRK VWRQLLREGI RVARCTVARL MAVMGLAGVL RGKKVRTTIS RKAVAAGDRV
NRQFVAERPD QLWVADFTYV STWQGFVYVA FIIDVFAGYI VGWRVSSSME TTFVLDALEQ
ALWARRPSGT IHHSDKGSQY VSLAYTERLK EAGLLASTGS TGDSYDNAMA ESINGLYKAE
VIHRKSWKNR AEVELATLTW VDWYNNRRLL GRLGHTPPAE AEKAYYASIG NDDLAA