Gene EcSMS35_4765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4765 
Symbol 
ID6145916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4865478 
End bp4866512 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content47% 
IMG OID641619578 
Producthypothetical protein 
Protein accessionYP_001746685 
Protein GI170680748 
COG category[R] General function prediction only 
COG ID[COG3943] Virulence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATA ACATCCCACA AGCTCCTCAA GGTGAGTTTG TTCTTTTCAC CAGTGCTGAT 
GGTCAAACCC GCGTTGAGTG TCGTTTTGAG TCTGACACCT TGTGGCTTTC TCAGGCTGCA
ATGGCAGAGC TTTATCAAGT TAGCTCTCAA GCAATCACCC AACACGTAAA AGCTGTCTAT
TCTGAAGAAG AGCTTGAGCA AATTTCAACT TGTAAGGATT ACTTACAAGT TCAACTGGAA
GGTGGCAGAG AAGTAAAGCG AAGCATTCGT CACTACAGTC TTCCGGTTAT TCTTGCAGTA
GGATACCGAG TTCGCTCAAC ACGTGGCACC CAGTTCCGCC AATGGGCAAC CAGAATGTTG
CAAGAATACC TAATCAAAGG ATTCGTCATG GATGACGAGC GCCTGAAAAA TCCGCCCATT
GGCCATTCTG CTGTGCCAGA TTACTTTGAT GAAATGCTGG AACGCATTCG TGATATCCGA
GCTAGTGAGC GTCGCGTTTA TCTGCGAGTC AAAGAAATCT TTACCATGGC TGCTGATTAC
GAGCCATCTA ACCAAGAGAC CAACCGCTTC TTCCAAACCA TTCAGAATAA GCTGCATTAT
GCTTGTACGC ATATGACGGC TGCTGAGCTT ATCGCCAGCC GTGTGGATGC CAGTAAGCCG
GATATGGGCT TAACCAGCTA TAAAGGCGAT GAAGTGCGCA AGACAGACGT TACTGTTGCC
AAGAACTATT TGCGTGAAGA CGAAATCAAA GAGCTTAATC GCATCGTCAA TATGTGGCTC
GACTTTGCTG AAGACCAAGC ACTGCGTCGC AAGCAGGTAT TTTTACAGGA CTGGGCCGAT
AAGCTTGACC AGTTCTTGAG TTTTAACGAT AGAGATGTAT TAAACGGTGC AGGAAAAATC
TCCAAGAAAG ACGCTGATGA CAAAGCGAAA TTGGAGTTTG ACCGCTTTGC CCAGCAGCGC
CGTCGTTTAA AAGAAGCCGA AGGCGCACGG GCCAATATCG CAGCCCTCAA GGCCATACTA
AAAAAAGATA AATAG
 
Protein sequence
MADNIPQAPQ GEFVLFTSAD GQTRVECRFE SDTLWLSQAA MAELYQVSSQ AITQHVKAVY 
SEEELEQIST CKDYLQVQLE GGREVKRSIR HYSLPVILAV GYRVRSTRGT QFRQWATRML
QEYLIKGFVM DDERLKNPPI GHSAVPDYFD EMLERIRDIR ASERRVYLRV KEIFTMAADY
EPSNQETNRF FQTIQNKLHY ACTHMTAAEL IASRVDASKP DMGLTSYKGD EVRKTDVTVA
KNYLREDEIK ELNRIVNMWL DFAEDQALRR KQVFLQDWAD KLDQFLSFND RDVLNGAGKI
SKKDADDKAK LEFDRFAQQR RRLKEAEGAR ANIAALKAIL KKDK