Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4758 |
Symbol | |
ID | 6143218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4856525 |
End bp | 4856737 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641619571 |
Product | IS1 transposase orfA |
Protein accession | YP_001746678 |
Protein GI | 170684253 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.267122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATGATG GTGATTTTAA GGTGCTTGCG TGGCTTCCAT TTCCATCAGA TGTCCTTCCT GCTCCGCTCC TGAAGGCGTG GTGCGTAACG GCAAAAGCAC TGCCGGACAT CAGCGCTATC TCTGCTCTCA TTGCCGTAAA ACATGGCAAC TACAGTTCAC TTACACCGCC TCTCAACCCG GTACGCACCA GAAAATCATT GATATGGCCA TGA
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Protein sequence | MYDGDFKVLA WLPFPSDVLP APLLKAWCVT AKALPDISAI SALIAVKHGN YSSLTPPLNP VRTRKSLIWP
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