Gene EcSMS35_4748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4748 
SymbolidnD 
ID6142906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4848285 
End bp4849316 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content48% 
IMG OID641619563 
ProductL-idonate 5-dehydrogenase 
Protein accessionYP_001746671 
Protein GI170683029 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTGA AAACACAGTC CTGCGTTGTT GCGGGCAAGA AAACTGTTGC CGTTACCGAG 
CAGACGATAG ATTGGAATAA TAATGGAACA TTAGTACAAA TAACCCGAGG TGGAATTTGC
GGTTCCGATT TACATTATTA TCAGGAAGGA AAAGTAGGTA ATTTCATGAT AAAGGCACCG
ATGGTGTTAG GTCATGAAGT TATCGGTAAA GTTATTCATA GCGACTCATC AGAATTACAT
GAAGGGCAAA CGGTAGCCAT TAATCCGTCT AAACCGTGCG GTCACTGCAA ATACTGCATT
GAACATAACG AGAATCAGTG TACAGATATG CGTTTTTTTG GCAGTGCCAT GTATTTCCCT
CATGTTGATG GTGGTTTTAC CCGTTATAAA ATGGTCGAAA CGTCGCAATG TGTCCCTTAT
CCGGCCAAAG CTGACGAAAA GGTTATGGCT TTTGCCGAAC CTTTAGCCGT CGCGATTCAT
GCCGCACATC AGGCCGGCGA GTTACAGGGC AAGCGAGTAT TTATTTCTGG TGTTGGGCCC
ATTGGCTGCC TGATTGTCAG TGCTGTGAAA ACACTGGGGG CCGCGGAAAT TGTCTGTGCC
GATGTGAGTC CCCGTTCCCT TTCGCTGGGC AAAGAGATGG GGGCGGAGGT GCTCGTAAAC
CCACAAAACG ACGACATGGA TCACTGGAAA GCGGAAAAAG GCTATTTCGA TGTCAGCTTT
GAAGTGTCCG GTCATCCTTC ATCAGTGAAT ACCTGCCTGG AGGTCACTCG TGCACGCGGC
GTAATGGTGC AGGTAGGGAT GGGAGGCGCG ATGGCAGAAT TCCCAATGAT GACGTTGATT
GGTAAGGAGA TTTCACTCAA AGGCTCTTTC CGTTTTACCA GCGAATTTAA TACCGCAGTG
TCATGGCTGG CGAATGGCGT TATCAATCCA CTGCCTTTAC TGAGTGCTGA ATATCCCTTC
ACTGACCTGG AAGAGGCGCT ACGTTTCGCC GGTGATAAAA CCCAGGCAGC AAAAGTCCAG
CTTGTTTTCT AA
 
Protein sequence
MQVKTQSCVV AGKKTVAVTE QTIDWNNNGT LVQITRGGIC GSDLHYYQEG KVGNFMIKAP 
MVLGHEVIGK VIHSDSSELH EGQTVAINPS KPCGHCKYCI EHNENQCTDM RFFGSAMYFP
HVDGGFTRYK MVETSQCVPY PAKADEKVMA FAEPLAVAIH AAHQAGELQG KRVFISGVGP
IGCLIVSAVK TLGAAEIVCA DVSPRSLSLG KEMGAEVLVN PQNDDMDHWK AEKGYFDVSF
EVSGHPSSVN TCLEVTRARG VMVQVGMGGA MAEFPMMTLI GKEISLKGSF RFTSEFNTAV
SWLANGVINP LPLLSAEYPF TDLEEALRFA GDKTQAAKVQ LVF