Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4748 |
Symbol | idnD |
ID | 6142906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4848285 |
End bp | 4849316 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641619563 |
Product | L-idonate 5-dehydrogenase |
Protein accession | YP_001746671 |
Protein GI | 170683029 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTGA AAACACAGTC CTGCGTTGTT GCGGGCAAGA AAACTGTTGC CGTTACCGAG CAGACGATAG ATTGGAATAA TAATGGAACA TTAGTACAAA TAACCCGAGG TGGAATTTGC GGTTCCGATT TACATTATTA TCAGGAAGGA AAAGTAGGTA ATTTCATGAT AAAGGCACCG ATGGTGTTAG GTCATGAAGT TATCGGTAAA GTTATTCATA GCGACTCATC AGAATTACAT GAAGGGCAAA CGGTAGCCAT TAATCCGTCT AAACCGTGCG GTCACTGCAA ATACTGCATT GAACATAACG AGAATCAGTG TACAGATATG CGTTTTTTTG GCAGTGCCAT GTATTTCCCT CATGTTGATG GTGGTTTTAC CCGTTATAAA ATGGTCGAAA CGTCGCAATG TGTCCCTTAT CCGGCCAAAG CTGACGAAAA GGTTATGGCT TTTGCCGAAC CTTTAGCCGT CGCGATTCAT GCCGCACATC AGGCCGGCGA GTTACAGGGC AAGCGAGTAT TTATTTCTGG TGTTGGGCCC ATTGGCTGCC TGATTGTCAG TGCTGTGAAA ACACTGGGGG CCGCGGAAAT TGTCTGTGCC GATGTGAGTC CCCGTTCCCT TTCGCTGGGC AAAGAGATGG GGGCGGAGGT GCTCGTAAAC CCACAAAACG ACGACATGGA TCACTGGAAA GCGGAAAAAG GCTATTTCGA TGTCAGCTTT GAAGTGTCCG GTCATCCTTC ATCAGTGAAT ACCTGCCTGG AGGTCACTCG TGCACGCGGC GTAATGGTGC AGGTAGGGAT GGGAGGCGCG ATGGCAGAAT TCCCAATGAT GACGTTGATT GGTAAGGAGA TTTCACTCAA AGGCTCTTTC CGTTTTACCA GCGAATTTAA TACCGCAGTG TCATGGCTGG CGAATGGCGT TATCAATCCA CTGCCTTTAC TGAGTGCTGA ATATCCCTTC ACTGACCTGG AAGAGGCGCT ACGTTTCGCC GGTGATAAAA CCCAGGCAGC AAAAGTCCAG CTTGTTTTCT AA
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Protein sequence | MQVKTQSCVV AGKKTVAVTE QTIDWNNNGT LVQITRGGIC GSDLHYYQEG KVGNFMIKAP MVLGHEVIGK VIHSDSSELH EGQTVAINPS KPCGHCKYCI EHNENQCTDM RFFGSAMYFP HVDGGFTRYK MVETSQCVPY PAKADEKVMA FAEPLAVAIH AAHQAGELQG KRVFISGVGP IGCLIVSAVK TLGAAEIVCA DVSPRSLSLG KEMGAEVLVN PQNDDMDHWK AEKGYFDVSF EVSGHPSSVN TCLEVTRARG VMVQVGMGGA MAEFPMMTLI GKEISLKGSF RFTSEFNTAV SWLANGVINP LPLLSAEYPF TDLEEALRFA GDKTQAAKVQ LVF
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