Gene EcSMS35_4732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4732 
Symbol 
ID6145372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4830083 
End bp4830535 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content50% 
IMG OID641619548 
Producthypothetical protein 
Protein accessionYP_001746656 
Protein GI170681395 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.750065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCG GAAATATTCA TAATCTTCAG CCGTGGCTAC CCCAAGAGTT ACGCCAGGCG 
ATTGAGCATA TCAAAGCAAA CGTTACGGCA GAAACGCCCA AGGGCAAGCA CGATATCGAA
GGCAATCGTC TGTTTTATCT TATCTCGGAA GATATGACCG AGCCGTACGA AGCTCGCCGT
GCGGAGTACC ATGCCCGCTA TCTCGACATT CAGATTGTGT TAAAAGGTCA GGAAGGCATG
ACCTTCAGCA CGCAACCTGC AGGCACCCCG GATACCGACT GGTTAGCAGA CAAAGACATC
GCATTTTTGC CGGAAGGCGT TGATGAGAAA ACAGTTATTC TTAATGAAGG TGATTTTGTT
GTGTTTTATC CGGGGGAAGT GCATAAACCG CTGTGCGCAG TGGGCGCGCC AGCCCAGGTT
CGCAAAGCAG TAGTGAAGAT GCTGATGGCG TGA
 
Protein sequence
MIIGNIHNLQ PWLPQELRQA IEHIKANVTA ETPKGKHDIE GNRLFYLISE DMTEPYEARR 
AEYHARYLDI QIVLKGQEGM TFSTQPAGTP DTDWLADKDI AFLPEGVDEK TVILNEGDFV
VFYPGEVHKP LCAVGAPAQV RKAVVKMLMA