Gene EcSMS35_4726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4726 
SymbolpyrB 
ID6146493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4826680 
End bp4827615 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content54% 
IMG OID641619542 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_001746650 
Protein GI170680939 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATC CGCTATATCA GAAACATATC ATTTCCATAA ACGACCTTAG TCGCGATGAC 
CTTAATCTGG TGCTGGCGAC AGCGGCGAAA CTGAAAGCAA ACCCGCAACC AGAGCTGTTG
AAGCACAAAG TCATTGCCAG CTGCTTCTTC GAAGCCTCTA CCCGTACCCG CCTCTCTTTC
GAAACTTCCA TGCACCGCCT GGGTGCCAGC GTGGTGGGCT TCTCCGACAG CGCCAATACA
TCACTGGGTA AAAAAGGCGA AACGCTGGCC GATACCATTT CGGTTATCAG CACTTACGTC
GATGCGATAG TGATGCGTCA TCCGCAGGAA GGTGCGGCGC GCCTGGCCAC CGAATTTTCC
GGCAATGTAC CGGTACTGAA TGCCGGTGAT GGCTCCAACC AACATCCGAC GCAAACCTTG
CTGGACTTAT TCACCATTCA GGAAACCCAG GGGCGTCTGG ACAATCTCCA CGTCGCAATG
GTTGGTGACC TGAAATATGG CCGCACCGTT CACTCCCTGA CCCAGGCGCT AGCGAAGTTC
GACGGCAACC GTTTTTACTT TATCGCGCCG GATGCGCTGG CAATGCCGCA ATACATTCTG
GATATGCTCG ATGAAAAAGG GATCGCCTGG AGTCTGCACA GCTCTATTGA AGAAGTGATG
GCGGAAGTAG ACATCCTGTA CATGACCCGC GTGCAAAAAG AGCGTCTGGA CCCGTCCGAG
TACGCCAACG TGAAAGCGCA GTTTGTTCTT CGCGCCAGCG ATCTCCACAA CGCCAAAGCC
AATATGAAAG TGCTGCATCC GCTGCCGCGT GTTGATGAGA TTGCCACCGA TGTTGATAAA
ACGCCGCACG CCTGGTACTT CCAGCAGGCA GGCAACGGGA TTTTCGCTCG CCAGGCGTTA
CTGGCACTGG TTCTGAATCG CGATCTGGTA CTGTAA
 
Protein sequence
MANPLYQKHI ISINDLSRDD LNLVLATAAK LKANPQPELL KHKVIASCFF EASTRTRLSF 
ETSMHRLGAS VVGFSDSANT SLGKKGETLA DTISVISTYV DAIVMRHPQE GAARLATEFS
GNVPVLNAGD GSNQHPTQTL LDLFTIQETQ GRLDNLHVAM VGDLKYGRTV HSLTQALAKF
DGNRFYFIAP DALAMPQYIL DMLDEKGIAW SLHSSIEEVM AEVDILYMTR VQKERLDPSE
YANVKAQFVL RASDLHNAKA NMKVLHPLPR VDEIATDVDK TPHAWYFQQA GNGIFARQAL
LALVLNRDLV L