Gene EcSMS35_4724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4724 
Symbol 
ID6142916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4825747 
End bp4826172 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content51% 
IMG OID641619540 
Productputative endoribonuclease L-PSP 
Protein accessionYP_001746648 
Protein GI170684125 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA CTTTTTACCG CTGTAATAAA GGAGAAATCA TGAGCAAAAC TATCGCGACG 
GAAAATGCAC CGGCAGCTAT CGGTCCTTAC GTGCAGGGCG TTGATCTGGG CAATATGATT
ATCACTTCCG GTCAGATCCC GGTAAACCCG AAAACGGGTG AAGTACCGGC AGACGTCGCT
GCACAGGCAC GTCAGTCGCT GGATAACGTA AAAGCGATCG TCGAAGCCGC TGGCCTGAAA
GTGGGCGATA TCGTTAAAAC CACCGTGTTT GTGAAAGATC TGAACGACTT CGCAACCGTT
AATGCTACCT ACGAAGCCTT CTTCACCGAA CACAACGCCA CCTTCCCGGC ACGTTCTTGC
GTTGAAGTAG CCCGTCTGCC GAAAGACGTG AAGATTGAGA TCGAAGCGAT CGCTGTTCGT
CGCTAA
 
Protein sequence
MSQTFYRCNK GEIMSKTIAT ENAPAAIGPY VQGVDLGNMI ITSGQIPVNP KTGEVPADVA 
AQARQSLDNV KAIVEAAGLK VGDIVKTTVF VKDLNDFATV NATYEAFFTE HNATFPARSC
VEVARLPKDV KIEIEAIAVR R