| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4722 |
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| Symbol | treR |
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| ID | 6147153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4821519 |
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| End bp | 4822466 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641619538 |
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| Product | trehalose repressor |
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| Protein accession | YP_001746646 |
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| Protein GI | 170680573 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02405] trehalose operon repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.557711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATC GGCTGACCAT CAAAGACATC GCGCGCTTAA GCGGCGTGGG GAAATCTACG
GTTTCCCGGG TGCTGAATAA CGAAAGCGGC GTGAGCCAGC GCACGCGCGA GCGTGTTGAA
GCAGTGATGA ATCAGCATGG ATTTTCCCCT TCCCGCTCTG CGCGCGCTAT GCGTGGGCAA
AGCGATAAAG TGGTCGCCAT CATTGTTACC CGTCTGGATT CGTTGTCAGA AAATCTCGCC
GTTCAAACCA TGCTGCCAGC GTTCTATGAA CAAGGTTACG ACCCAATCAT GATGGAAAGT
CAGTTTTCCC CGCAATTAGT TGCCGAACAT TTGGGGGTCC TGAAACGGCG TAATATCGAC
GGCGTAGTGC TGTTCGGTTT TACCGGCATA ACAGAAGAAA TGTTAGCCCA CTGGCAGTCA
TCGCTGGTTC TGCTGGCGCG TGACGCAAAA GGCTTTGCTT CAGTCTGTTA TGACGACGAA
GGGGCAATCA AGATCCTGAT GCAACGGCTG TATGACCAGG GGCATCGTAA TATCAGTTAT
CTCGGCGTGC CGCATAGTGA CGTGACGACC GGTAAGCGAC GTCACGAAGC CTACCTGGCG
TTCTGCAAAG CGCATAAATT GCATCCCGTT GCCGCTCTGC CAGGGCTTGC TATGAAGCAA
GGCTATGAGA ACGTAGCAAA AGTGATTACG CCTGAAACTA CCGCGTTACT GTGCGCAACC
GACACGCTGG CACTTGGCGC AAGTAAATAC CTGCAAGAGC AACGCATCGA CACCTTGCAA
CTGGCGAGCG TCGGTAATAC ACCGTTAATG AAATTCCTCC ATCCGGAGAT CGTAACCGTA
GATCCCGGTT ACGCCGAAGC TGGACGCCAG GCGGCCTGCC AGTTGATCGC GCAGGTCACC
GGGCGCAGCG AACCGCAACA AATCATCATC CCCGCCACCC TGTCCTGA
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| Protein sequence | MQNRLTIKDI ARLSGVGKST VSRVLNNESG VSQRTRERVE AVMNQHGFSP SRSARAMRGQ
SDKVVAIIVT RLDSLSENLA VQTMLPAFYE QGYDPIMMES QFSPQLVAEH LGVLKRRNID
GVVLFGFTGI TEEMLAHWQS SLVLLARDAK GFASVCYDDE GAIKILMQRL YDQGHRNISY
LGVPHSDVTT GKRRHEAYLA FCKAHKLHPV AALPGLAMKQ GYENVAKVIT PETTALLCAT
DTLALGASKY LQEQRIDTLQ LASVGNTPLM KFLHPEIVTV DPGYAEAGRQ AACQLIAQVT
GRSEPQQIII PATLS
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