Gene EcSMS35_4711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4711 
Symbolmpl 
ID6146027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4810483 
End bp4811856 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content56% 
IMG OID641619527 
ProductUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 
Protein accessionYP_001746635 
Protein GI170681037 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC ATATTTTAGG AATTTGTGGC ACGTTTATGG GCGGTCTGGC GATGCTGGCG 
CGCCAGTTAG GCCATGAAGT AACGGGTTCG GACGCCAATG TGTATCCGCC GATGAGCACC
TTACTTGAGA AGCAAGGCAT TGAACTGATT CAGGGTTACG ATGCCAGCCA GCTCGACCCG
CAGCCGGATC TGGTGATTAT TGGCAACGCC ATGACCCGTG GAAATCCGTG TGTGGAAGCG
GTACTGGAAA AAAACATCCC TTATATGTCA GGTCCGCAGT GGCTGCACGA TTTTGTGCTG
CGTGACCGCT GGGTGCTGGC CGTTGCCGGT ACACACGGCA AAACCACCAC GGCGGGAATG
GCGACCTGGA TTCTGGAACA GTGTGGTTAC AAACCAGGAT TTGTGATCGG CGGTGTGCCG
GGGAACTTTG AGGTCTCGGC GTGTCTGGGC GAAAGCGATT TCTTTGTTAT CGAAGCGGAT
GAGTACGACT GCGCCTTCTT CGACAAACGC TCTAAATTTG TCCATTACTG CCCGCGTACG
CTGATCCTCA ACAACCTTGA GTTCGATCAC GCCGATATCT TTGACGACCT GAAAGCGATC
CAGAAACAGT TCCACCATCT GGTGCGTATC GTTCCGGGGC AGGGCCGTAT TATCTGGCCG
GAAAACGACA TCAACCTGAA ACAGACCATG GCGATGGGCT GCTGGAGCGA GCAGGAGCTG
GTGGGCGAGC AGGGGCACTG GCAGGCGAAA AAGCTGACCA CTGACGCTTC CGAATGGGAA
GTCTTGCTGG ATGGCGAAAA AGTGGGCGAA GTGAAATGGT CGCTGGTGGG CGAACATAAT
ATGCACAACG GCCTGATGGC GATTGCGGCG GCCCGTCATG TTGGCGTAGC GCCAGCAGAT
GCTGCTAACG CGCTGGGTTC GTTTATTAAC GCTCGTCGCC GCCTGGAGTT GCGTGGTGAA
GCGAATGGCG TCACGGTATA TGACGATTTT GCCCATCACC CGACGGCGAT TCTGGCAACG
CTGGCGGCGC TGCGTGGCAA AGTTGGCGGT ACGGCGCGCA TTATTGCCGT GCTGGAGCCG
CGTTCGAATA CCATGAAAAT GGGGATCTGC AAAGACGATC TGGCACCTTC ATTAGGTCGT
GCCGATGAAG TCTTCCTGCT GCAACCGGCG CATATTCCGT GGCAGGTGGC AGAAGTGGCA
GAAGCCTGCG TTCAGCCTGC ACACTGGAGC GGCGATGTGG ATACGCTGGC AGATATGGTG
GTGAAAACCG CTCAGCCTGG CGACCATATT TTGGTGATGA GCAACGGCGG TTTTGGTGGG
ATCCATCAGA AACTGCTGGA TGGGCTGGCG AAGAAAGCGG AAGCCGCGCA GTAA
 
Protein sequence
MRIHILGICG TFMGGLAMLA RQLGHEVTGS DANVYPPMST LLEKQGIELI QGYDASQLDP 
QPDLVIIGNA MTRGNPCVEA VLEKNIPYMS GPQWLHDFVL RDRWVLAVAG THGKTTTAGM
ATWILEQCGY KPGFVIGGVP GNFEVSACLG ESDFFVIEAD EYDCAFFDKR SKFVHYCPRT
LILNNLEFDH ADIFDDLKAI QKQFHHLVRI VPGQGRIIWP ENDINLKQTM AMGCWSEQEL
VGEQGHWQAK KLTTDASEWE VLLDGEKVGE VKWSLVGEHN MHNGLMAIAA ARHVGVAPAD
AANALGSFIN ARRRLELRGE ANGVTVYDDF AHHPTAILAT LAALRGKVGG TARIIAVLEP
RSNTMKMGIC KDDLAPSLGR ADEVFLLQPA HIPWQVAEVA EACVQPAHWS GDVDTLADMV
VKTAQPGDHI LVMSNGGFGG IHQKLLDGLA KKAEAAQ